EMLSAT00000003241, EMLSAT00000003241-699088 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003241
Unique NameEMLSAT00000003241-699088
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s178supercontigLSalAtl2s178:231454..232215 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003241 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003241EMLSAG00000003241-686007Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014183EMLSAE00000014183-723111Lepeophtheirus salmonisexon
EMLSAE00000014184EMLSAE00000014184-723112Lepeophtheirus salmonisexon
EMLSAE00000014185EMLSAE00000014185-723113Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774965auto774965Lepeophtheirus salmonispolypeptide
EMLSAP00000003241EMLSAP00000003241Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003241

>EMLSAP00000003241 ID=EMLSAP00000003241|Name=EMLSAP00000003241|organism=Lepeophtheirus salmonis|type=polypeptide|length=204bp
MIEDPILTSLKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKT
LTVQGNRVKLAIWDTAGQERFRTLTPSYYRGGQGAILVYDVTNRDSFSNV
ENWLNELDTYATNHDIVKMLVGNKCDLEEKRAISKEEGQKCARKHRMMFI
ESSAKTREGVQLAFEELVENIIQTPELWEASSNNRINVNSNNNNIEPGSC
TGYC
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mRNA from alignment at LSalAtl2s178:231454..232215-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003241-699088 ID=EMLSAT00000003241-699088|Name=EMLSAT00000003241|organism=Lepeophtheirus salmonis|type=mRNA|length=762bp|location=Sequence derived from alignment at LSalAtl2s178:231454..232215- (Lepeophtheirus salmonis)
ATGATCGAGGACCCAATTTTAACTAGTTTGAAGTTACTGATCATTGGAGA
AAGTGGTGTGGGGAAATCTTCCCTCCTCCTAAGGTTCACGGAAGATGCAT
TCGATCCAGACCACTCAGCCACAATTGGAGTGGATTTTAAAGTCAAAACC
CTCACAGTTCAAGGAAATAGAGTAAAGGAGTCTGAGGATTGATTCTTCTC
GTTATTGATAATTGGATATTTTTCTATACTAGGTTAAATTAGCCATTTGG
GATACAGCTGGACAAGAACGATTTCGAACCTTAACGCCCAGTTATTATAG
AGGGGGACAAGGTGCCATTCTAGTGTACGATGTAACAAATAGAGATTCCT
TCTCAAACGTAGAAAATTGGCTCAATGAGTTGGATACCTACGCAACAAAT
CATGACATTGTGAAAATGCTGGTTGGAAATAAAGTATGTGGCAGGGATCA
GATCTTACTCAAAAAGAGATTTTTTCCTATACAACGTCAATTGATATTTA
TATCTCTTTTTGTTTCCAGTGTGATCTTGAAGAGAAAAGAGCGATTTCGA
AGGAAGAAGGACAAAAATGTGCTAGGAAGCATAGAATGATGTTCATAGAG
TCTAGTGCTAAGACTCGAGAGGGAGTACAACTTGCCTTTGAAGAATTAGT
TGAAAATATTATTCAGACTCCCGAACTTTGGGAAGCGTCCTCGAATAATA
GAATTAATGTAAATTCAAACAACAATAACATTGAGCCAGGTTCATGTACT
GGATACTGCTAA
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