EMLSAT00000003302, EMLSAT00000003302-699149 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003302
Unique NameEMLSAT00000003302-699149
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s181supercontigLSalAtl2s181:117884..119292 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003302 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003302EMLSAG00000003302-686068Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014428EMLSAE00000014428-723356Lepeophtheirus salmonisexon
EMLSAE00000014429EMLSAE00000014429-723357Lepeophtheirus salmonisexon
EMLSAE00000014430EMLSAE00000014430-723358Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772582auto772582Lepeophtheirus salmonispolypeptide
EMLSAP00000003302EMLSAP00000003302Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003302

>EMLSAP00000003302 ID=EMLSAP00000003302|Name=EMLSAP00000003302|organism=Lepeophtheirus salmonis|type=polypeptide|length=141bp
MRLMHLRSSNILFSKLSGRTLFNSICRNMSEGKNIFEKIIDREIPASFLH
EDEESVVFKDINPQAPVHFLVVPKKCYPKLEVMDDPGLMGRLMMVANKVA
KEQGLVKGYRVVINNGDEGGQEVPHLHIHVLGGKQLKWPPC
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mRNA from alignment at LSalAtl2s181:117884..119292-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003302-699149 ID=EMLSAT00000003302-699149|Name=EMLSAT00000003302|organism=Lepeophtheirus salmonis|type=mRNA|length=1409bp|location=Sequence derived from alignment at LSalAtl2s181:117884..119292- (Lepeophtheirus salmonis)
ATGAGACTAATGCACCTACGTTCATCCAACATTCTATTTTCCAAACTTTC
CGGCAGAACGTTGTTTAATTCTATTTGCAGAAACATGTCCGAGGTAATTA
TATTGATTAATTATTACATTACTTATGTTTTACATTATTCCTTKCCACTC
TATTAGGGTAAGAATATTTTCGAGAAGATTATTGATCGTGAGATTCCAGC
CAGTTTCCTTCACGAGGATGAGGAGTCCGTTGTTTTCAAAGATATTAATC
CTCAAGCACCCGTCCATTTCCTTGTCGTTCCAAAAAAATGTTACCCCAAA
CTTGAGGTCATGGATGATCCCGGGGTAAATACGTATTTGCTAATTGTCAA
ATAACTGACATTATTTCCTGTTTNCTTCAATTTTTTAAGTAATTTAATTT
GCATTTTCCTTAACTTTACTAAAAAAAGAAGTTTCTTTTATTCCAACATA
TTACTGATTTGTTACTAATTGTATTCAAGCTATGCTAAGGATACATAATA
TATATCCATCCTAAATCAATCTTGTAGCTATAATTGCTACTCGCTCAGGA
AACGCATAGAGAGCTTAATTGATCATTTTCTCACGTTTGGATATGAATGT
ATTTATTGCAGTGTTGTCTACAACGAATCTCTAGTAATGATATGTGTGTA
TGTTACGAAAATGTTCAAATATGAATGCACTTTTTATTGCTAATTACGTA
TGCGGCGCGTCAACACAAAAGACAGCTAGGCTTATTTTTCTCCAAATTAT
GTCTGGATTACACTTGTATTCTTGGACAAGTTGTCGTCGATTTTTATCAA
TAAATAACTCTTGTTAATTGTTCGGGTGTGCCGCAAATTGAACTTAAAGT
AGCCAAAATTGATCTTCACGATAAAAAATTGGGAAGTTGACAGATTTTAT
TTGAAAGTATCCATATAAGGGCCAATATAAGCCTCATAATTCAATAAAAA
GTGAATTAATTTTAGATATAGTTAAGAAACTATATCTAAAATTCATGGAT
ATCTTTGCTCATCTCACAAATTTGTATACAAGCCCTATTATTTACTCAAA
TATGCCTATTAAATATTGGTTTGCATGTATGTATGAAGTATACAAATAGA
TTTGGATTTTCTCTTTTTCTTAAAGATTGCTTTTATATTGACACACCTAC
TGGAATATTTGAAGGAACTTTTACTCAGCATATACTATTTGTAGTCAATT
TAATCCATTTGAGTAATTATTTTAATCATTTATTATTTATACAGCTTATG
GGACGCTTAATGATGGTAGCCAACAAAGTAGCTAAAGAACAAGGATTGGT
TAAAGGATATCGAGTTGTGATCAACAATGGGGATGAAGGTGGTCAAGAAG
TGCCACACTTGCACATTCATGTACTAGGTGGGAAACAACTTAAGTGGCCT
CCATGTTAA
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