EMLSAT00000003312, EMLSAT00000003312-699159 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003312
Unique NameEMLSAT00000003312-699159
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s181supercontigLSalAtl2s181:311109..312030 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003312 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003312EMLSAG00000003312-686078Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014477EMLSAE00000014477-723405Lepeophtheirus salmonisexon
EMLSAE00000014478EMLSAE00000014478-723406Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776214auto776214Lepeophtheirus salmonispolypeptide
EMLSAP00000003312EMLSAP00000003312Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003312

>EMLSAP00000003312 ID=EMLSAP00000003312|Name=EMLSAP00000003312|organism=Lepeophtheirus salmonis|type=polypeptide|length=286bp
MSKILNGLLNRKGCKVETKISSNVLSQAQHIAIGKTNILGEDLPRVKELI
YGEEHKIKLQSQTAVFFRINITRKDLDHGVIIRCKSTYSDKFKVIFFDAN
GDISVCKESEYSTNGSEGNFLFFPFRHYHLKMEHNYMNTGKDMPKAFSLL
EFFDLNYESIEPGNHLFCVYQNNWINSGNCILSCLKVQPCHGNIIEEIKD
LEEDIQGKKTELDQLKVEYKEVKEKYENILNKVHTLTPAVNERISTRLDL
YHQLFSECKETPIGGVISEYDSRGVFKNIFSTFKGS
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mRNA from alignment at LSalAtl2s181:311109..312030-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003312-699159 ID=EMLSAT00000003312-699159|Name=EMLSAT00000003312|organism=Lepeophtheirus salmonis|type=mRNA|length=922bp|location=Sequence derived from alignment at LSalAtl2s181:311109..312030- (Lepeophtheirus salmonis)
ATGTCCAAAATTTTAAATGGGCTATTAAATCGCAAAGGTTGTAAAGTTGA
AACAAAAATTAGTTCCAATGTTTTGAGGTAATATATTGTTTGAGTATCAA
GGTTATCATCATTTATTTTCACCTTCATTATTCTTTAGTCAAGCTCAACA
TATTGCTATAGGGAAAACAAATATACTTGGTGAGGATCTGCCTAGGGTTA
AAGAATTGATCTATGGCGAGGAACATAAAATTAAGTTACAAAGTCAAACT
GCGGTATTTTTTAGGATTAATATAACAAGAAAGGATTTAGATCACGGAGT
CATCATTCGCTGTAAAAGCACATACAGTGATAAATTCAAAGTCATCTTTT
TTGACGCAAATGGAGACATTTCCGTGTGTAAAGAATCCGAGTATTCTACT
AATGGAAGTGAGGGGAACTTTCTGTTCTTTCCCTTTCGTCATTATCATTT
GAAAATGGAGCATAATTATATGAACACTGGGAAAGATATGCCAAAAGCAT
TTTCTTTACTTGAATTTTTCGATTTGAATTATGAATCTATAGAGCCGGGA
AATCATTTATTTTGTGTTTACCAAAACAACTGGATAAATAGTGGAAATTG
CATTTTATCTTGTTTAAAAGTTCAACCTTGTCACGGAAACATTATTGAGG
AAATTAAAGATTTAGAAGAGGATATACAAGGGAAGAAAACAGAATTGGAT
CAATTGAAGGTGGAATATAAAGAAGTCAAGGAAAAATATGAAAACATCTT
AAATAAAGTACACACATTAACTCCTGCTGTGAATGAAAGGATATCCACTC
GATTAGATTTGTATCATCAATTATTCTCGGAATGTAAAGAAACTCCTATA
GGGGGTGTTATTAGTGAATATGACTCGCGTGGKGTTTTTAAAAACATATT
TTCGACTTTTAAAGGTTCATAA
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