EMLSAT00000003318, EMLSAT00000003318-699165 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003318
Unique NameEMLSAT00000003318-699165
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1821supercontigLSalAtl2s1821:32028..34985 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003318 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003318EMLSAG00000003318-686084Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014489EMLSAE00000014489-723417Lepeophtheirus salmonisexon
EMLSAE00000014490EMLSAE00000014490-723418Lepeophtheirus salmonisexon
EMLSAE00000014491EMLSAE00000014491-723419Lepeophtheirus salmonisexon
EMLSAE00000014492EMLSAE00000014492-723420Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769953auto769953Lepeophtheirus salmonispolypeptide
EMLSAP00000003318EMLSAP00000003318Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003318

>EMLSAP00000003318 ID=EMLSAP00000003318|Name=EMLSAP00000003318|organism=Lepeophtheirus salmonis|type=polypeptide|length=189bp
MVIFSLTPLLVLFCSSVCSQNNHVLEAFMDDDIFEALSLTPQNTLGTLSI
YFDFFVESGTEYSRESTQETPAVDLSPFMEYEKKYTLIMADPDALSRSNP
VFRSYLHWIVSDLSFQNSDLRNGDVPYVGPGPPKGTGLHRYIFLLFEQTC
FVDLGGFSNENRKSFNVGEFASGNNMKLIAGNYFLAQNK
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mRNA from alignment at LSalAtl2s1821:32028..34985-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003318-699165 ID=EMLSAT00000003318-699165|Name=EMLSAT00000003318|organism=Lepeophtheirus salmonis|type=mRNA|length=2958bp|location=Sequence derived from alignment at LSalAtl2s1821:32028..34985- (Lepeophtheirus salmonis)
ATGGTTATATTTAGTCTTACACCGCTCTTAGTATTATTTTGTTCATCTGT
TTGTTCGCGTAAGTTATTTGCTATTTATGAAACTATGAATTATTATTGTG
YCAGCCATTATTTAGAACTGAAAGTACAATCAAGTGTTGAATTAGTCATT
TACCACACTTATCGAGCGTGTACACTTATATCTTAAATATATATATTATT
AATTCTTGTTAGTTGAATACAGGAAGTTTTATGTGAAAACAACTCTTCTC
CAGATATTATTTATATAAATATATACTTATATATTCACTTAGATATGTAC
AGGATAGAGGTGTTAAATCGCCATAAGACTGATTGATTAAAATTGATGAA
AAAAATTAAGCTAGTCCATTTATTTTTTATTTTTTGAATTGGTACTCTAA
ATTCTAAATCGGGAGGGCCGGAGGAAATTATTCCCCCCCCCCCCCGCCAG
TAAGGAATTCTTGATTCTTACTAGAAAATTAAATATTTGAAATTTAATTT
AATTTGTCAAATTTTTTATAAAAAGAATAATCGTTTCTGAATAGTTATGA
ATTTTTGCAATATTCTCTGAAAAATTTGATTAAAGAAATATTTTTCCAAA
AAATTTAATTTTTTTAGAATGGCTCTTGATTTTTGAAATTTTTTACTTAA
GAATTTATTTGTATTTTAATATCTATGAATTCTTGCATTTTTTCTCCGGA
AAATTTAATAGTTGAAATTTTTTTTCAAGAATAGAATTTAGAAGTTTGTT
CCTCAAAAAATGTAATTGTCCCTCAATAGCTCTGGATTTTTGAATTTTTT
TTCAAAAAAATTTAATTTTTCAATTTTTTTCCAAATAATTTAATTTATCA
ATTTTTTTCCAAATAACTTAATTTTTCAATTTTTCCCCAAAAAATTTAGT
TTTTGGAATTTTTTTCAAAAAATTCCAAAAACCAAGAAACTACCCCCCCC
CCTGTTTTACATGACGTCAGTATTGCTTGTCGGCTATTGTTTGAGTAGCT
TGATCAAAAAAGTTTTTATAACTTTTTTCATTAATATTAAGAGAAATAGT
AAAATGTTWATCANATAATAGGGAACACAATTTAAATAACTTTTCAACCT
TACTATCTATCAAAAATATATTCCTCTAATGGCAAGTTTTTTTATATGTA
TGACCCTAATATGTACTAAGAATATTTTATTACATATTTATATAATATTA
TTTCCATAAAATAAACAATAAATTAACTATGCCATGGAAATAAAGATGTT
TTTATCTAATTAACCTACTTTGCAGATATCTAATTGATCTAGAAAATAAT
TAATTTTACAAATCTAGCTATTTGTTGGGATTTTTAATACATATTACTTT
AACAAGGGCCTCCGTAGGGGGTGGGCTGGAGGGACTGGTACCCTCCATTC
CTCCCAAAAAAAGGAATTCTTATTTTTTACTAGAAAATTGAAGAGTTAAA
TCTCTTTAAAATTAAAAAATTAATTTTAAAATTTTTTACAAAAAGTTTAA
TTTTTTGTAAATCGCTGCGTGTTTTTGAAATTTTTTCAGAATAACTAAGG
ATTTTTTGCGAATAGCTGTGAAAAAAATTTCAAAAATTAAATGTAAAATT
TTAAATTTCTTCGATTTTTTTTTTTAAATCCACATTTATTCACAAACAAA
TCCATAATATTCCTCAAAAAAAATTAGAATCCAAATTTATTCACATTAAA
GTACATAATTATATATAAAAATTTTGAAATTTTTTTGTAATATTACATTT
TTTGTAGAAAAATTTCAAAAATCCATAGCTATTTACGGAAAATTATTATT
TTTTGGAAAAAATAAAACTTTAATTAAATTTCAAATATTTAATTTTCTAT
TTAACAGCAAAAGTTCCTTAATTTGGGGAAGGGCTAAAGCCCCTCCGGCA
CCCTCTGCGGCAGCCCCTCAAAGGAATACAGTGAATAGCTGACTCAACTT
TGCTTCCCGTAGTGTTATGTCAATTCTTATTTATTCAGTCCAGTCCAATC
TTTGGACGGACCTTTAAGACCTTTGGTCATTTGGACAGACTATGTATAAC
TGATTAAATAAAGAAGAAGTAACGATAATGACGTCATCAATGACCGAATT
TTATTATTTTTTGACTGATATGAAGAACTGAATACGGCCGGACTGTAGTA
TTCTGTTCTAATTAAGGACCGTCTCAACACCAGCCTCCAGTCTTTGATTA
AATATTTTATAGTTATAGCCATTATTTATAAGTCTAATAAGTTGAAAATG
GTTTAACTCCTATCATGAATACAAACTTAATGTTCTATAAAGCAACTTTA
TGGACTTTCCCTACCTTTTTTTCAGAGAATAATCATGTTTTGGAGGCATT
CATGGATGATGACATTTTTGAGGCGTTGAGCCTTACACCACAGAATACAT
TAGGTACTTTGAGCATCTACTTTGATTTTTTTGTCGAGAGTGGAACAGAA
TATTCTAGGGAGTCCACTCAAGAGACTCCGGCTGTAGATTTGTCACCCTT
TATGGAGTACGAAAAAAAATACACGCTGATCATGGCGGATCCTGATGCTC
TAAGTAGATCTAACCCTGTCTTTAGGTACCTTCAAAAAAATTATATTGAA
TGAAATTGTTAATATCTATTATTTACATAGGTCATATCTTCATTGGATCG
TTTCGGATCTGTCTTTTCAAAATTCAGATTTGAGAAATGGGGATGTTCCA
TACGTAGGACCTGGACCTCCAAAAGGAACTGGACTCCATCGTTATATATT
TCTTTTATTTGAACAAACTTGTTTTGTGGATTTGGGTGGATTTAGTAATG
AGAACCGAAAGAGTTTCAATGTGGGGGAGTTTGCCTCGGGAAACAACATG
AAGCTTATTGCCGGAAATTATTTCTTAGCACGTAAGTCATTCACTCTAAA
GTATAACATTTATGGTATGGCTATTAATATTATTATTTTATTGATAGAGA
ATAAGTAA
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