EMLSAT00000003325, EMLSAT00000003325-699172 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003325
Unique NameEMLSAT00000003325-699172
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s182supercontigLSalAtl2s182:403482..407147 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003325 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003325EMLSAG00000003325-686091Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014523EMLSAE00000014523-723451Lepeophtheirus salmonisexon
EMLSAE00000014524EMLSAE00000014524-723452Lepeophtheirus salmonisexon
EMLSAE00000014525EMLSAE00000014525-723453Lepeophtheirus salmonisexon
EMLSAE00000014526EMLSAE00000014526-723454Lepeophtheirus salmonisexon
EMLSAE00000014527EMLSAE00000014527-723455Lepeophtheirus salmonisexon
EMLSAE00000014528EMLSAE00000014528-723456Lepeophtheirus salmonisexon
EMLSAE00000014529EMLSAE00000014529-723457Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777337auto777337Lepeophtheirus salmonispolypeptide
EMLSAP00000003325EMLSAP00000003325Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003325

>EMLSAP00000003325 ID=EMLSAP00000003325|Name=EMLSAP00000003325|organism=Lepeophtheirus salmonis|type=polypeptide|length=368bp
MFVKPLSINDLVFISYIILLPKILKMAQYKGPASESQRAMHLQKKRERHQ
EDIEIKRKKLSDELKVGKMESKFSSRIDQVDNDLKTSTVGLLTMEEMKTR
QENALKEREKMLARKDLERQEEIQKNEKHKLELRLKRKSQIKTLSFNLDE
DEEEDSDESTNSEKDGKLKPEDESESKSKDEGPKEIIDEGDEKSKKRLGK
DPGVDTSFLPDVDRDEAENKLREELRQKWVEKQKALKDESINIVYSYWDG
WGHRRSLTMKKGKTIYQFLQKALETLRPDFPDLKVVTADQLMYARGKSGP
LFNFDVHDDVRLMSDHRLEKDESHAGKVVLRSWYERNKHIFPASRWEPYD
PSKTYDKYTVGDALKKKL
back to top

mRNA from alignment at LSalAtl2s182:403482..407147+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003325-699172 ID=EMLSAT00000003325-699172|Name=EMLSAT00000003325|organism=Lepeophtheirus salmonis|type=mRNA|length=3666bp|location=Sequence derived from alignment at LSalAtl2s182:403482..407147+ (Lepeophtheirus salmonis)
CAACTAGGCAAATGACAAAAAATGGTATGGTGACGTCATGTGATGTATAA TAAAAGTGACATCTTGCGTGGGAAAAAGATAACTCCTCTACGGATTGTTT ATCAGCTCAAGCTAACAGGCAAGTTTTGGCACTTTTAAAAAAAAGCTAGA GAGTGGGTAAAAGAGAGCGCAGAGGAGGAAGCGAGAGTGAGTAAGTTGTC CAGCAGGAGAGGAAAAAAGAGTGTAACTAGCTAGAAAGAAAAAGTTAAGG AAAAAAGCTGTGCAGCTGTGTTTGTATTAGTATAATAGAATATGAGAATA GCTATTACCGCTAGAGTACTACTACACTCTACATTGTTGAAGTGAAAAGG GAGGCGAAGTCTAGAGACGCCATAATAATATATATTTGAGCGCGACTCGG ATCTTTAATCTCTTTCTCTGATTGATAAGGACTTGAAAAAGGTAAGTAAT CCACTTAGTCTAATAGTTGCTTCTTTATTTGGAGAGATTTCTTGGGAGGG CTTCTCGTTGTGACTTCTGGAGAGTGCGTGCGAGTTTGTTGGAAGTGTAG CTTGTGRGATTGGCCTTACCGGCGTCACAGTCGCCTCATTGCTTTTGTGT GAGAAAGGGTCTGATTCGTTAGTAGTACTTGGGTGATGGTGGGGGCCTTT GACCCATTGCTTGTTTGATGTTCTGAGGAAGTGCCTGGCATATCCCCAGA GACTGACGCTGTGTTTTTCTTGCAGATGCCCCGAGGCGGTGAGCTTGAAG AAGAGGAGGAGGAATATTCCGTGGAGAAGGTTCTGGATAAGCGTGTGGGC AAGAATGGAAAGGTGGAGTACCTCCTGAAGTGGAAAGGCTACGGAGACGA AGACAACACTTGGGAGCCCAAAGAGAATTTGGACTGCGAAGATCTCATTG AAACCTTCGAAAAAAACAGGAGAATGAAAAAGGAAGCGGAAAAGTCGAAG AGCGGCGGGAACAATAGCAGCAGCAGTGGCGGCGGCRGCGGCAGCAGTAC CAACAACAACAACAACACAGACTCCACCAGCTCCAGTACGAACCAAGCGG AGAAGCGGAAAAGTACAAGCTCTTCCAACGAAAAAAGCAAATCCAGAAAA GCAGATGATGATCGTCCCAGGGGATTTGACCGTAATCTTGACCCTGAACG CATCATTGGAGCCACAGATTCCTCGGGAGAACTTATGTTTCTCATCAAGT GGAAAGGCTCTGATGAAGCGGATCTTGTGCCGGCTARAGAAGCAAAWGTG CGATGTCCTCAAACAGWGATCAAGTTCTATGAGGAACGCCTCACATGGCA CACATCAAACCAAGAAGATGAACCTGAGGATTAGTTCAATTCAAGTAATA AAGCAACAAAAAAAATAATTAAAAAAATGAAGGAGATTGTTGGAACAGTT TGTGAACAGTGTAGTGATTCATTTCCAAGCATTTAATGTTCGTGAAACCC CTTTCTATCAACGACCTCGTATTTATATCATATATTATACTTTTACCCAA GATATTGGTAATTCTATACAACTGTTTTATCTTTTTTCTTTCTTTTTGTA TATACAAATATATATAAGTATTATTTTCCCTTCCAAATGATAGAATAAAA CCTTAAACAAGTAATCTCCTAATTTGTACCTACTTCATTTAAAGGAGGGG TGGGGGATTTATACATCCACTATTGTACCATATCAACGAAAACCCGAATC AGATTCTTGATAAATGCATGTTAATAACAATTTCTTATTAATGGCGGKGC TTATGATGTCTCATATGATTAATTATAGAAAATGGCTCAGTATAAGGGAC CTGCAAGTGAAAGCCAGAGGGCTATGCACCTCCAAAAAAAACGGGAACGA CATCAGGAGGATATTGAAATCAAAAGAAAGAAGCTTTCGGACGAGCTAAA AGTTGGGAAAATGGAATCCAAATTTTCTTCTCGAATAGATCAAGTTGATA ATGACTTAAAGGTATCATTGATTATACATATTAAGTAAAGCTGTATAATA AATAATTAATTATACCACATTCAATTAAAAGACTTCAACTGTTGGATTAC TTACGATGGAAGAAATGAAAACTAGGCAAGAGAACGCCCTGAAGGAAAGG GAAAAAATGCTTGCCAGAAAAGATCTTGAGAGGCAAGAGGAAATTCAAAA AAATGAAAAGCATAAGCTTGAACTGAGATTGAAGAGAAAGAGTCAAATCA AAACACTCTCCTTTAATCTCGATGAGGACGAAGAGGAGGATAGTGATGAG AGCACTAATTCTGAAAAGGATGGAAAATTAAAACCCGAGGTAGATTCTCC CTGATACTAATGAATACTTACATTTTTATAATAATTTGTAAATGTATATC TAGGATGAGTCTGAATCCAAATCTAAGGATGAAGGTCCTAAGGAAATTAT TGATGAGGGGGATGAAAAATCTAAAAAAAGATTAGGGAAGGATCCTGGTG TAGATACCAGTTTTTTGCCAGATGTTGATAGAGACGAGGCWGAAAATAAG CTCAGAGAAGAGCTGCGACAAGTAGCTGCAAATTCCTCACCCCCTTCTCG GATGATTTTTTATAGTTTTCTATTTGTAGAAATGGGTGGAAAAGCAAAAA GCACTAAAAGATGAATCTATAAATATTGTTTATTCATATTGGGACGGATG GGGTCATCGAAGGAGTCTTACTATGAAAAAAGGCAAAACTATTTATCAAT TTCTTCAGAAAGCATTAGAAACTCTTCGACCAGATTTCCCGGACCTCAAA GTTGTAACTGCTGATCAGCTCATGTACGTCAAAGAGGATTTAATCATACC TCAGACCAATAGTTTCTACGATTTTATCGTCACAAAAGTGAGTTGATATC ATATCACTTTTGGTTCATAACTCTTCAGTCTCCCATATTATAAAACTTTC TTTCAAATACTTAAATGTAGTACTATGGGCTATCAAAAAGTATAAGTTTA ATCACATTTATATAATTGATTGTATGTTTTTTTGGGGGGGAATATATGTT TTAAAAAATATTAAAGGAAAAAATTGCCCAAATTATAGTTCTTAAAACTC AACGAAAAAAATAAATATATATAACTTTTTATATTAGCTCATTCCATAGA TTAAATTATAAATTCTTAGGAGCTTAAATGATTTTTTTTCCTATTTAAAT TAGATTANCCCCTCGATAACTAAGGGCAGCCCTGATAATAACCAAGTAAT TTTAAAGGATCAAAATGAAATGATAGCATCAATTGATTGTTGTTTGCTAA AATGACTGATGATTTATAAATAGTACACAACATACATATATATATATATA AAGATTATCTTTAGGTCTATATAATAGACCTGAAGATAAACTTATTTCAC TTGTTTTAAAAAACTTTTTTATTTTTAGGCAAGGGGTAAATCAGGTCCAT TGTTTAATTTTGATGTTCATGATGATGTTCGTCTCATGAGTGATCACCGT TTAGAAAAAGATGAATCACATGCTGGAAAAGTCGTACTTCGTTCATGGTA TGAAAGAAATAAGCATATATTTCCTGCATCACGTTGGGAACCTTATGATC CATCCAAGACTTATGACAAATATACAGTTGGGGATGCATTAAAGAAAAAG CTGTGATTAATTAAATATTAATAAATAATAATATACATTATGAATGAGTG TGTATTTAATTTGAAA
back to top
Add to Basket