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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1831 | supercontig | LSalAtl2s1831:20657..25171 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003344 >EMLSAP00000003344 ID=EMLSAP00000003344|Name=EMLSAP00000003344|organism=Lepeophtheirus salmonis|type=polypeptide|length=544bp
MINDILPQIEDYIRSYGDGSLVPILMKGVPYSLNVYSRHIDPFLLHFSAL
RLVLTPYQDGKFVIIKLLTRSLTLFKEPLSLSPESIKTSEEFHSLLDILL
SNKYMSCVGLAQRYGHEEVLVERWDKTLVYRSFNCSYVVKDTNLCSHCAQ
LKSSIKRNENSVESLDFCDRIITERDIDINIDAFNDSDGIDLDVAPPPIT
PSKKNNKNYINKRVLRKRKVTFVDKESSKAYNCPVCEHSFVEIKEYKAHC
MEHTDXLMCYEKETCTKKFKNKKSLEVHLRRHRDTKRPFVCTICSRKFNS
DEELQSHSFRHSGEKPFCCEICSKKFAKKSQVRIHMAVHTGEKAHLCPEC
GSSFGSMSTLIDHRKRLHLALRPNKCSTCFKCFYSKQELIIHIRVHTGER
PFPCKMCDKSFTRSHHLKRHSDNVHKKKDDFSSLAPVKYSDEEEEDDNVM
VIVGEDKSEKDETQIVLQTASYDTGPILVTKTNETPPILSSNVTSSLLDL
SQIVTENDVEQISENEFEETKYVIIESDDGSAKLIQYSESNNGK back to topmRNA from alignment at LSalAtl2s1831:20657..25171+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003344-699191 ID=EMLSAT00000003344-699191|Name=EMLSAT00000003344|organism=Lepeophtheirus salmonis|type=mRNA|length=4515bp|location=Sequence derived from alignment at LSalAtl2s1831:20657..25171+ (Lepeophtheirus salmonis)
CTGCTTTTAACTTTTTACAGTTGGATTGTTTTATTTTCAATATTCATGGT
GTATTTAATATTAATTAATTAATAATTATAGTGTATTTAAATTTGAATTT
ATGTAGTTCAGTGCTTAGATGTGGTTATGGGAGGATTAATTACTTCGATA
GAAAACTAATTTAATTTCAAATTGTCTTTATTATGGACTTGTCATAATGA
TTAACGACATATTGCCGCAGATTGAAGACTATATAAGATCTTATGGCGAT
GGATCCTTAGTTCCTATACTCATGAAAGGAGTCCCTTACTCCCTCAACGT
TTACTCTAGACACATTGATCCTTTTCTTCTTCACTTTAGTGCCCTACGCC
TTGTTCTCACGCCATATCAGGATGGTAAATTCGTTATCATCAAACTCCTT
ACTCGGTCTCTTACCCTATTCAAGGAGCCTTTATCCCTTAGTCCCGAGTC
TATTAAAACCTCAGAGGAGTTTCACTCTCTCCTTGACATACTTTTGTCTA
ATAAGTATATGTCATGTGTGGGTCTGGCCCAAAGATATGGTCATGAAGAA
GTCCTTGTCGAGAGATGGGATAAAACGTTGGTTTATAGATCATTCAATTG
TTCTTATGTTGTGAAGGATACGAACTTATGTTCTCATTGCGCTCAGCTTA
AATCCTCAATTAAAAGGAATGAAAACTCTGTGGAATCTTTGGATTTCTGT
GATAGAATAATTACTGTATGCTCTTAATTATACATAGTTAATTGTTTATA
TAGTTCTTTATTTTTTATTTTTTTTAATAGGAAAGAGATATTGATATAAA
CATTGATGCATTCAATGATTCAGATGGCATTGATCTGGATGTAGCTCCTC
CTCCGATAACTCCGTCTAAAAAGAATAATAAAAATTATATTAACAAAAGA
GTTTTGAGGAAACGAAAAGTTACTTTCGTTGATAAAGAGTCTTCCAAAGC
TTATAATTGTCCTGTTTGTGAGCATTCCTTTGTGGAAATCAAGGAGTATA
AGGCTCATTGTGTAATTAACTATTTAATATATCTTCTGCATGATTGTATT
TTTTTTTTTTTTTTTTCTAGATGGAGCATACAGATTTNTTAATGTGTTAC
GAAAAAGAGACCTGCACTAAGAAATTTAAAAATAAAAAGAGCTTAGAAGT
GCATCTCCGTAGACACAGAGACACAAAAAGACCCTTTGTTTGTACGATTT
GTAGTAGGAAATTTAATTCCGATGAGGAGCTGCAATCCCACTCCTTTCGT
CATTCTGGGGAAAAACCCTTCTGTTGTGAAATTTGTTCCAAGAAATTTGC
TAAAAAAAGTCAAGTTAGAATTCACATGGCAGTCCATACTGGGGAAAAAG
CTCACCTTTGCCCGGAATGTGGAAGTTCCTTTGGCTCAATGTCCACTCTG
ATTGATCACCGAAAGCGACTACATTTAGCTCTTCGCCCCAACAAATGTTC
TACATGTTTTAAGTGTTTTTATTCTAAGCAAGAGTTGATAATACATATTC
GAGTACATACGGGGGAGAGACCCTTTCCATGCAAAATGTGTGATAAGTCT
TTTACTCGATCTCATCACCTCAAAAGACATTCAGACAATGTTCACAAAAA
GAAAGATGATTTCTCTAGCTTAGCTCCTGTAAAATACTCGGATGAAGAAG
AGGAAGACGACAATGTCATGGTCATAGTTGGGGAGGATAAAAGTGAAAAG
GATGAGACTCAAATAGTACTTCAAACCGCCAGCTATGATACAGGTGAAGA
ATAAATATATTTTGATACAAGTGCTTCTCAATTTAAAAGTATTTTGTTTC
TTCATTTTAAGGACCTATTTTAGTTACAAAAACAAATGAAACCCCTCCTA
TACTATCTAGCAATGTCACCTCTTCCCTATTGGACTTGTCACAGATCGTG
ACCGAGAATGATGTAGAGCAAATCTCTGAAAATGAATTTGAGGAAACGAA
ATACGTCATCATTGAGAGTGATGATGGTAGTGCTAAATTAATTCAATACT
CGGAGAGTAACAATGGCAAATGATAATAATTATTTTACACATTTATTTAA
TGAATATGGCAACCATATACATGGCTATGTTGAAAGATATTGAGTAATTA
TAATTAATATATGTAGGTTTATATATATATATATAAAGATAAAGTCTAGA
AAGTTAATGTAAAAATGGTACAAAAAGTGCAAATCATTTGTTTGGCACAA
ATTTAAGAGTTAAAAACTCGTGAGTAAGTTAAAAAAACTTTAAAAAAGTA
CACTAAAATTGGAATGGGGGAGGAATGATTACTGCAATACTGAGAACGGC
TARWAGGATACAAAWATAATAGAAAWATGTTAAGATATCCCGGAATTAGT
CAGTGGATTGATGTTTGAAAAACTCTGTGAGAGAGCTAAGTTCTGATGGC
TCAACATTTGTAGCAAAACGTGATATTTCAGAGCCAGGATTCCCTGATTG
AATAGTAAATTCGATTTCATCCCCTGTATTAATGGCATCCCTATCTTCTG
TCGTCCACTTTTTGTGCGATGGAGCATAAAGGAACAAGAGTCCAAATACG
TATATGTTCCACATTCCATACACACCTAAAAAAAGAAGTATAATTTATGA
TTAATTTGTATGAATGTCCCTAAAAGACACGTACCCGTCATAAAGCCCGA
AGTATACTCTAAGGATATGTCCTCGTCCCATTTATATTGTCCTTCAGAAA
CTTGCCCAATTATGAATCCAATGACCGTCATCATAGCAGTTATAACGGTG
GCCAACATTAGAAATCTGAATCTCCAAATGATCCCTTCATATCGAAGACG
TCGAACTTTTGGCATAGTGGAAATAGATGCCTAAATTTTATATATATTTA
TATTTTTTAAGAAAAAAAATGTCATGAGGAAGACAAAGAGTAAGAATGTC
ACAAGTACTACTTACTCTCTTATCGGATATGGTTCTAAATACTTGATAAA
TCAAGTAGCAAAGAAAGAGAAAATAAATCCCCGCAGATATTCCAGCCATG
ATGATAAATCCCAAAGCTAGATTTGTTCCCAAGTCTGTAACCCAAATGGA
ATAAAATGGATTCCGTAGTTGAACTCCCCTTTCACACATGTCGAAGATAA
AAAGACAAAGACAACCGAAAAAGMCGMCGGCCAGCTTCTTCCAATAGGCA
TAAATCCCATCTCTTTCCCCAAGAGATCTCGTGTCATTGAGTAAATGCTC
TCCAGCAAATATCATCCAAAAAGCTAAAAGTGTAGCATAAAAAATCCCTT
GTTTTATATCGCTTAGGACATTAATCCAGGGTATGTCATAGATTAAAGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAATACTCGATGG
GAATGTTGAGTAAACTCAAGGCGCAGCCCAGTGTAAGTAGCATTTTTTCT
AAAAGTGTAGGACTTCGTGCAAGCAGGGTTATGCGTCTCCAGAACCAAAT
GAGCTCAACAATAATAACAGGGAAAAAAATGGTTTTCAATGCGACCCATA
TCATAGTGAATCCCCCATTTTGATAAATGGTGATCAACCAAAGGTCTACC
AATTTACCCAATTTGTCATTAATATCATGTACTTGACCGTCACTTTCAAA
AATGGATGGAATCCGAATATTGAGTAAGTAATAATCATGATGAAGTGAGC
CAAGGTCAAATAGTGGTAGAATAGAGCAATTATAGTAATGCCCGTCTACT
TTGTGAATTTCATCAATGTCGCAGTCTAGATTCCTTGCAACACTAGAAGA
AGCATACTCCTTCCAGTCCCCTGGAGCATCCCTCTTATTCCTATAACCAA
GGCGTACATCCATCATAAGAGGAACGCGGCTCTCCCGCTCCACCTCATCC
TCATAAACGATGTCAGCTGAGAGTATTCCGATGAGAGTTTGTTGCCAACG
GCTAAAAATGAGATAAGAAAAAAAGACATTGAACATTATTAAAATATGAT
AAGAATCCTCGACCCTTTCAGTCTGTATATTTAATTATTATCATTTTCAA
ACCTAAAGTCGAGAGAGCTATTCTCTTTTGGAAGAGGGAGTTGAAATGTA
AAGACCACATTCTCTGCAGTTAACCCTGGTGGCATTGTCTCATTATCATC
AAAAGAATCAAATCTTGGACATTGTCCAGGACCCCTTGAATAGAACCATG
TCTTACGGTCCCCCTTATAGTCAATGCACTTTGTTGCTAAGATGTTGTCA
CTTGAGTTAGGTCTAGGACTAACCACTGCACCAAGTAGGAAACATACAAT
TTCGCAAAGAATGAGTGAGCCCACAACGAGACCCACTTTCCGCCCAGACA
TATTTTCTATTATCGCTCCCACAGTCATGATGATTGAAGCTCTTTGTGGA
TCACAACCAAAAGAGAACTATCAATCTTTAGTATTACTAACTCAAAACTT
TTCAGTTTTCTTCCTCCCCCCTTCTTTGGTGAAGATGATGAAGAGGAATT
CCCTCAGCCAGTCAA back to top
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