EMLSAT00000003360, EMLSAT00000003360-699207 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003360
Unique NameEMLSAT00000003360-699207
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1842supercontigLSalAtl2s1842:28659..30525 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003360 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003360EMLSAG00000003360-686126Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014642EMLSAE00000014642-723570Lepeophtheirus salmonisexon
EMLSAE00000014643EMLSAE00000014643-723571Lepeophtheirus salmonisexon
EMLSAE00000014644EMLSAE00000014644-723572Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769874auto769874Lepeophtheirus salmonispolypeptide
EMLSAP00000003360EMLSAP00000003360Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003360

>EMLSAP00000003360 ID=EMLSAP00000003360|Name=EMLSAP00000003360|organism=Lepeophtheirus salmonis|type=polypeptide|length=118bp
MSNSIPSLSSSIKNKNITINNIDPSIWKEYTALCEHIYYVMNKLDPGYSK
NRGKILKDYIRALMNLAKIENNLGSINNVEFNKRKEMAKYFSKELIGCYK
HEKFSSSKMKSNGNSFKL
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mRNA from alignment at LSalAtl2s1842:28659..30525+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003360-699207 ID=EMLSAT00000003360-699207|Name=EMLSAT00000003360|organism=Lepeophtheirus salmonis|type=mRNA|length=1867bp|location=Sequence derived from alignment at LSalAtl2s1842:28659..30525+ (Lepeophtheirus salmonis)
ATGGGTCTCCCAACCCGACGGGAATTACTCCTAGAACATTGGGGTTTTAC TTGTAACTGCTCACGATGTAAGGATCCGAGTGAGTTGGGGACTTACACAT CCGCTGTTAAGTGTAGTAGCTGTCAAAGTGGATATTTTCTACCTTCACTT GACCTCCTGAAAGAATGGAGTTGCAATAGTTGCTCCAAAGGGTTGTCAAA GATAAGGCTCCAGATGATTATTAATGAAAACACTGAGAAAATCCGGTTTT TACAAAATAAATTAGGTATTGAAACTTATTTAATTATTTTATATCCCTTC TAGGACTGCAACCAGGAGTCAAGGCCCAAAAATAGACGTACTAAAAGAAC TTATTGTAGATCTAAAAGACAGCTTACACGAAAATCATTTTCTAATCCTT CAAGTAAGTAGCAAATAGGAATGTATCAAGTTCTACACGATGTCAACTTT TAAGAAAATGTATATGTCTAGAGTTGTTCATTATAAGTATTTAGACGGGT GTAAAATTCTTGCAGTTGGCAATTCAGGCAGTTATATATATATATATATA TTCCGTAGTGATTATTCCTACTCTTTAATTCTTGAGGAGATGTTATCTAA GTATAATGTAACCAGGAGGGCGTGTGCTCACCAAAGAAAGAAAGTATTTC TTATAACTGCCTGTAGTTAATCTAATCGAACAGCTAACTGACAGCTAACC TGTTCTCCTTCGACACATTTTTTAATGTGTATCGTTTTATAATATCATTT TTTTTAGTTTCTCTCATTATTCAGGGGCGTCTGCAGTATTATATTTTTTT TTTTGGTGGGTTGGTTGGTTGGTTGGTTTTAGGATTTTTTCAAATCCAAA AATCCATTTTTTTTAAACAAATTTGAAAATTTAATTTTTGGGGAAAAAAA AATTTTTTTTACAAAACTTAAAAAAAAAAATAACCTATACTATACTATAG CCCCTCCAGCACACCCGCTGCAGACACTCCTGTTATTACATACTGGCAGK GTTTAGAATTTACAACTGTAAATAACTTTGTCCCTAAGGCTGTAAATCCT AAAAAAGAAACTAGAGCTTACACTTAAAACTCCTAATTGTTACACTTGAA CAATCAACTGGACACACTTTTGTGATTATATTTAATAAATATAATTTCTC TCGTCAAGAATAATGATAACAGCTTTAAAAAAGTTAAAAACGCTGATTTG GTTGTCATCAAAGAAAAACCTCATGACCTAAAAAAATTCTTAAGATTTAG AATCCTGTATTTTTATTCGGGCTTTTGTACGGGTATTAATGTTTGATTTT ATATACGCAGGTTGAATATATTCTGGTCGTCCTTATGTCCAATTCAATTC CGAGCCTCAGCTCCTCGATTAAAAACAAGAACATCACAATCAATAACATC GATCCTTCCATTTGGAAAGAATACACTGCCCTGTGTGAACATATTTATTA TGTCATGAACAAACTTGATCCGGGGTATAGTAAAAATCGAGGGAAAATCC TCAAAGACTACATACGGGCTCTAATGAATTTAGCAAAAATTGAAAACAAT TTAGGATCCATAAATAATGTAGAGTTTAACAAACGAAAGGAAATGGCAAA ATATTTTAGTAAGGAGCTGATTGGATGCTACAAACATGAAAAGTTTTCTT CCTCCAAAATGAAATCAAATGGAAATAGTTTTAAACTATGAAAACTTACC TATACAAGTATATATCAGAGCAAAAACGATTGATACAGGGGTACAAATGT TATTAATTGAGTATTTATATATGTTTTAATTACTTTGTTAAATTTTTTGA GGTATCTAAATAAAATAAAAAAAACTAATGAAAAGTGATGGTTAAGACTT TTTCAAATCTGCAGTCG
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