EMLSAT00000003361, EMLSAT00000003361-699208 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003361
Unique NameEMLSAT00000003361-699208
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1843supercontigLSalAtl2s1843:25686..26905 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003361 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003361EMLSAG00000003361-686127Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014645EMLSAE00000014645-723573Lepeophtheirus salmonisexon
EMLSAE00000014646EMLSAE00000014646-723574Lepeophtheirus salmonisexon
EMLSAE00000014647EMLSAE00000014647-723575Lepeophtheirus salmonisexon
EMLSAE00000014648EMLSAE00000014648-723576Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769707auto769707Lepeophtheirus salmonispolypeptide
EMLSAP00000003361EMLSAP00000003361Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003361

>EMLSAP00000003361 ID=EMLSAP00000003361|Name=EMLSAP00000003361|organism=Lepeophtheirus salmonis|type=polypeptide|length=218bp
MKLFLIFVCLGLVAGELSSEWTLWKKLHGKRYASFQIEELIFKIYEENRI
KIQKHNAKAQNGLHTYTLAMNQYGGLLQSEFLQRNTGLAKGSFSGENTVI
LDNSAPVPSYVNWTKNGAVTXVKDQKDCGSCWAFSTTGSVEGQYFIKNKK
LLSFSEQQLVDCSSDFGNKGCNGGLMDIIAHKGIATEKKYPYIGDEEKCS
YNKTMAAGQINSFKDIEC
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mRNA from alignment at LSalAtl2s1843:25686..26905+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003361-699208 ID=EMLSAT00000003361-699208|Name=EMLSAT00000003361|organism=Lepeophtheirus salmonis|type=mRNA|length=1220bp|location=Sequence derived from alignment at LSalAtl2s1843:25686..26905+ (Lepeophtheirus salmonis)
ATGAAACTATTTTTAATTTTTGTATGCCTTGGACTTGTGGCTGGYGAATT
RTCCAGTGAATGGACTCTATGGAAGAAACTTCATGGAAAGAGATATGCTT
CTTTCCAAATTGAAGAACTTATATTCAAAATTTACGAAGAAAACAGAATA
AAAATCCAAAAGCATAATGCAAAAGCCCAAAACGGACTTCACACTTATAC
TTTGGCAATGAACCAATATGGAGGTTTAGTAAACAATTATCCACATTCTC
CATTGATTGAAAATATGTAATTTACATTTACAGCTTCAAAGTGAATTTCT
TCAAAGAAATACTGGATTGGCCAAAGGATCCTTTTCGGGAGAGAACACTG
TTATTTTGGACAACAGCGCACCGGTTCCTTCTTATGTTAATTGGACCAAA
AATGGAGCAGTTACAMCAGTCAAAGACCAAAAAGATTGTGGATCATGTTG
GGCTTTTTCGACTGTATGTATTTGAACAAAAGATCTGGAATCTTTAATAT
GGGTATCTTTAAATTTCAGACTGGCTCTGTAGAGGGACAATATTTCATCA
AAAACAAGAAGCTTCTTTCTTTCAGTGAGCAACAATTGGTGGATTGCTCC
TCAGATTTTGGAAATAAGGGATGTAATGGTGGATTGATGGATATTATTGC
TCATAAAGGTATAGCTACAGAGAAAAAGTATCCATATATAGGAGATGAAG
AAAAATGTAGTTATAATAAAACAATGGCGGCAGGACAAATTAACTCTTTC
AAAGACATTGAATGTTGAAGTGAAGACCAATTAAAATTGGCTGTTGCCCA
AATTGGTCCAATTTCTGTTGCCATTGATGAGGCATCTCCCGAATTTATAT
TTTATGAAAGAGGTGAATTATCATTAAATATATATATTTTTTTTTGAAAT
TTTATGGTAATTGATTGTAATATTTTATCGATAGGCGTTTATTACAACAA
CGATTGTAGTTCTACTGAATTGAATCACGGTGTTTTGGCTGTTGGGTATG
GTACAGACAAGAGATCTGGATTGGATTATTGGCTAYTTAAAAATTTATGG
TCTGCATCTTGGGGAGACCACAGATACATCAAAATGGCCAGGAATCATAA
GAACTTGTGTGGTATTGCAACCCTGGCTTCATATCCTGTCATTTAACTGC
ATAAAATGATTCCGTTTAAATATAACTTCAGCTCTATATTTTGTACTTTT
TTAAAATACAAATAATACAA
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