EMLSAT00000003375, EMLSAT00000003375-699222 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003375
Unique NameEMLSAT00000003375-699222
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1851supercontigLSalAtl2s1851:16797..17679 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003375 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003375EMLSAG00000003375-686141Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014736EMLSAE00000014736-723664Lepeophtheirus salmonisexon
EMLSAE00000014737EMLSAE00000014737-723665Lepeophtheirus salmonisexon
EMLSAE00000014738EMLSAE00000014738-723666Lepeophtheirus salmonisexon
EMLSAE00000014739EMLSAE00000014739-723667Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769254auto769254Lepeophtheirus salmonispolypeptide
EMLSAP00000003375EMLSAP00000003375Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003375

>EMLSAP00000003375 ID=EMLSAP00000003375|Name=EMLSAP00000003375|organism=Lepeophtheirus salmonis|type=polypeptide|length=144bp
METNRVLILHLLSFCLFHQCFGILSNTTCEDTDETYCHSSIGSSKESCFD
AAFQYTCPKSCGICDAKCRDSNGACYRDSIEECFEPQIANECPKSCAGCD
ESNCNNAYYDDTVCEEYQARDTCDDELRSTKMKEMCKKTCNGCE
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mRNA from alignment at LSalAtl2s1851:16797..17679+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003375-699222 ID=EMLSAT00000003375-699222|Name=EMLSAT00000003375|organism=Lepeophtheirus salmonis|type=mRNA|length=883bp|location=Sequence derived from alignment at LSalAtl2s1851:16797..17679+ (Lepeophtheirus salmonis)
AGTTTTCAAAATCAAGAGCCATGGAAACAAACCGAGTACTGATCCTACAT
TTATTGAGCTTCTGTTTATTTCATCAATGTTTTGGAATTTTGTCGAGTAA
TTAGAAGCACTTTTGTACATCTTGGAGTTTACAATCCAATATTTCTTTAT
CTTTTAGACACTACCTGTGAAGATACCGATGAAACCTACTGTCATTCATC
AATAGGTTCTAGCAAAGAATCTTGCTTCGACGCTGCGTTTCAATACACTT
GCCCTAAATCTTGTGGTATTTGTGATGGTAAACTATAAAATACATATTTA
TCTATAGCTGCATTCTTATAACTAATATCATGTATCTTTCCATTCACTTA
GCTAAGTGTAGAGATAGTAATGGTGCTTGCTATAGAGATTCTATAGAGGA
ATGCTTTGAACCTCAAATTGCAAATGAATGTCCGAAATCGTGTGCCGGAT
GTGATGGTTAGTATTAAAGTTGTTCGTTGTGTATCCCATTAACTAATTAA
ATTATTTTATAAATAGAATGCGAGGACCTGATTTCTATTGAATTTTGGTA
ATTGATTAAAAATCGATGCAACACGGATGCTTCAGTTCGATATTCTTGTA
GAAAAGCCTGCAACTTATGCAGTAAGATTATTACTTATTATTAATTTACC
ATATAACTTATGCATTTGAATTATAGAGAGTAATTGTAATAATGCATATT
ATGATGACACCGTTTGTGAAGAATACCAAGCTAGAGAYACCTGTGATGAT
GAACTTCGTTCAACAAAAATGAAAGAAATGTGCAAGAAAACCTGTAATGG
TTGTGAATAAATTCAAAACAACATTGTTCTATTAAAACAAAAATCATTTG
ATATTTCCAATTGTAATCATTAATTTTTATTTT
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