EMLSAT00000003376, EMLSAT00000003376-699223 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003376
Unique NameEMLSAT00000003376-699223
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s18545supercontigLSalAtl2s18545:1..486 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003376 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003376EMLSAG00000003376-686142Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014740EMLSAE00000014740-723668Lepeophtheirus salmonisexon
EMLSAE00000014741EMLSAE00000014741-723669Lepeophtheirus salmonisexon
EMLSAE00000014742EMLSAE00000014742-723670Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767763auto767763Lepeophtheirus salmonispolypeptide
polypeptide-auto767764auto767764Lepeophtheirus salmonispolypeptide
EMLSAP00000003376EMLSAP00000003376Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003376

>EMLSAP00000003376 ID=EMLSAP00000003376|Name=EMLSAP00000003376|organism=Lepeophtheirus salmonis|type=polypeptide|length=115bp
MLQGRIMVENRTGLILNISSGGGLKYLLNVPYGIGKAACDRMAADCAVEL
KNKNVTMVSIWPGXVKTEEIKNRVLENPEARNSAKXTFESGELTEFTGMA
IVKLASDPNTIQCTG
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mRNA from alignment at LSalAtl2s18545:1..486-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003376-699223 ID=EMLSAT00000003376-699223|Name=EMLSAT00000003376|organism=Lepeophtheirus salmonis|type=mRNA|length=486bp|location=Sequence derived from alignment at LSalAtl2s18545:1..486- (Lepeophtheirus salmonis)
ATGCTTCAAGGTAGGTCTATATTTTTAGAAAAATTATCTCATTATCAAAA
AATTGGATCATACTGATTTATGACTGAGTGTATTTAAAGGATCATGGTAG
AAAATAGAACTGGCCTAATATTGAACATCAGCTCTGGTGGTGGACTCAAG
TATTTACTCAACGTACCCTACGGAATTGGTAAGGCAGCATGCGATCGAAT
GGCTGCTGATTGTGCTGTAGAACTTAAAAATAAGAATGTTACAATGGTCT
CTATTTGGCCAGGTCYGGTGAAAACTGAGGAAATAAAAAATAGGGTTTTG
GGTTCGTATACACGCAAGTTACATCAAAGGTGCATTTAGTTTACTAATGA
TATGTTCAACACTCTAGAAAATCCTGAGGCACGGAATAGTGCCAAAAKAA
CGTTTGAATCAGGAGAATTAACAGAGTTCACGGGGATGGCGATCGTCAAA
TTAGCATCAGATCCTAATACAATTCAATGTACAGGG
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