EMLSAT00000003380, EMLSAT00000003380-699227 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003380
Unique NameEMLSAT00000003380-699227
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s185supercontigLSalAtl2s185:325637..327668 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003380 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003380EMLSAG00000003380-686146Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014757EMLSAE00000014757-723685Lepeophtheirus salmonisexon
EMLSAE00000014758EMLSAE00000014758-723686Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776400auto776400Lepeophtheirus salmonispolypeptide
EMLSAP00000003380EMLSAP00000003380Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003380

>EMLSAP00000003380 ID=EMLSAP00000003380|Name=EMLSAP00000003380|organism=Lepeophtheirus salmonis|type=polypeptide|length=78bp
MDLQSLVSEGNIFQEMQLLDELFENVEYSEYSRTLAPGLQTEHLRSSTHY
DMNLPELFLDNGEELESNWNVIANILLL
back to top

mRNA from alignment at LSalAtl2s185:325637..327668-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003380-699227 ID=EMLSAT00000003380-699227|Name=EMLSAT00000003380|organism=Lepeophtheirus salmonis|type=mRNA|length=2032bp|location=Sequence derived from alignment at LSalAtl2s185:325637..327668- (Lepeophtheirus salmonis)
TCTACAGCCATTGAACTTTTGGAATTTCTGGAGGAAAATGTTTCCGCCCT TACATCAGCAGAGTCCATGGATCTTCAGTCCCTCGTTTCTGAAGGGAACA TCTTCCAGGAAATGCAATTATTAGATGAATTGTTTGAAAATGTTGAATAT TCAGAGTATTCCAGGACCTTGGCACCAGGTCTTCAGACTGAGCATTTACG GTCCTCTACTCACTACGATATGAACTTACCTGAGTTGTTTTTGGATAATG GTGAAGAGTTGGAAAGTAATTGGTATAAGAGGGTCTATATTCGAAAGTAT ATAATAGATCCTTTTGAGGATAACATCAAATGGGCTCATGTCTCTCATGG TAAGATATTTTGTGTCTTTTAAAATTGAAATGTATCTTTGTTTTGAGTTG TAAATCTGTTGCTCTTATTAGCATGTAACATTTTTAGTAATTGGCAATCT GAAGAACATGCTTTGGTTGTTTTTTAACTCTTGTGGAGAGACCATCTACA GAGATGTGAAAGTTGTTTAAATTCTATTGACCATATAGAAATTTAAAGGA AATAAATGTTAATAACCTTCAAGGATTTTGTGCTGTAATTAATTATTTCT CCTTATTATGAAAATTTAAACTTAGTAGCAAGCAAGATCACTATAGTTTG TAACATAATCTATCAACTTGTGTTGGATCGGTCTAAAAAAACTTAAAGGA CTGTAGTTCTGAATCCGGTCCTAATAAAATTTGCCAGTCCTTATCCTTTT TTATGGTAACAAAAACAGCTTAATGAACATATTTACTAATTATATCAATT CAGTCTGTGAAGTTTCATCATAACTTTTTTCAAAGAGACAAGCTATCGGA AGTTTAAAGTAGACTGTATGTGGCTARAACATATTATTATAAGTTCTAGC TATCATTCATAATTTTGTTCGTTTTATATTCTTCAATCCTTGCTAAACTA AAAAAATAAGTCCTAGGACCGATCCAACATTATCGTTAATATATATGTAG TCTTTCAATATCACCAAAAAAATAACTATTTTTTAGCTGTCGGGTATTTT AACAATTTTCACATTTCTAGAATAATGTTTAAATTTAAATGAAACATAAT CAAATATACGTTTTAATTGAGAGGTGGAAAGTAACAAATATGAATTACAA AAGATATATAATTGTAAGTCTCTGTTGGGCTTAGAGAATAATTGAAATGG TGAGTCATTCCTTTATTCGATTCGGATTTATGATTGTTTCATTATTTCCA TAGCCTTTTTGATTATTGTTGTTGTAGTCCTTATATATTCTGTACAATCC AGTTCCGTCTTAGGACCTGTCATATTACTCCTTAAAACATGTCTATATAA ATATATGTCCTTCCGACTGTCTATACTAGAATTGATTAACAAAAGAAGTA GTAAAGTTGAGTGAACTAAATCAGTTGAAGGACTGAAATGAACCTCACTA GAGCTAAAAATTTCACAGTATTTGGTTCTTAGCTGTTGATGTTTCGACTT ATTTTTCCCTTATCAAAAAAAATTGTTTGTCTGCCAATTCCTCCTAAATA TGGAATTAATTATGGTTGCAAACTATTTAAAGAATAAAAACAGTTAATTC TATTTCAATCAATCAACGTTAAGTGAATTGATTACGAAAAAAGAAGCATA GCCATGTATATTTTGTAATAGCGATATGAATTCATGCTCAACGTTGATTG GTAGATTTAAATTGAGTTTTTGTGGAGATGTAAATAATTCCCAACAATTA TTAATCACCATTTCATAGATGGGAAGAATTTTGCAAACTACCAATTGATT TTGGTCTTATTTTTTTACTGCTTCGTTTCAATGTTATAAGTGCAAGAATC AATTAAGGAATTGACTTGCTAATAAGCCGGCACAAGAAATAAGCTGCCTT TCATGTTAAACATTCTTGTCATTTTAAAGTGTTTTTATTTTATTTTACAT ACATGTTAAGCATTTTTTTGATATCAATAAATATATAATTTTGTTTTTAA GGAACGTTATAGCAAACATTTTATTACTTTAA
back to top
Add to Basket