EMLSAT00000003392, EMLSAT00000003392-699239 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003392
Unique NameEMLSAT00000003392-699239
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s186supercontigLSalAtl2s186:457668..459319 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003392 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003392EMLSAG00000003392-686158Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014815EMLSAE00000014815-723743Lepeophtheirus salmonisexon
EMLSAE00000014816EMLSAE00000014816-723744Lepeophtheirus salmonisexon
EMLSAE00000014817EMLSAE00000014817-723745Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777852auto777852Lepeophtheirus salmonispolypeptide
EMLSAP00000003392EMLSAP00000003392Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003392

>EMLSAP00000003392 ID=EMLSAP00000003392|Name=EMLSAP00000003392|organism=Lepeophtheirus salmonis|type=polypeptide|length=324bp
MEDAKFRITKELFLSNPKNKFTKLSGCSYYNSPPKACFWSPDGTCLLTSH
DDAHFRLYELPNDPPLPELMKPVLDIPKTECIYSMDWYPKMSSMDPVTSV
FLSTARASPIHLLDAFNGFIRATYRCYDEADEVTAAMSVKFDRTGGRIYA
GLTTGRIDVFDTAIPGRDPLLRYGKGQIGLGMLSSIDLIFXRKNNEIVVW
DLRNPGKLFGILKRTVETNQRIHFHTLDNDLVISGNTDGSIKVYDLKSSP
VIVNDEPHIYPIWSQDNVHQDSINCVHVHPFLPLLSTTSGQRIYSKPCDN
EEEGEDAKKIIRDNSLGIWNMSFV
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mRNA from alignment at LSalAtl2s186:457668..459319-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003392-699239 ID=EMLSAT00000003392-699239|Name=EMLSAT00000003392|organism=Lepeophtheirus salmonis|type=mRNA|length=1652bp|location=Sequence derived from alignment at LSalAtl2s186:457668..459319- (Lepeophtheirus salmonis)
ATGGAAGACGCCAAGTTTAGGATAACAAAAGAGCTTTTTCTCTCGAATCC CAAGAACAAATTTACGAAATTGAGTGGATGTAGCTATTATAACTCTCCTC CTAAGGCTTGTTTCTGGTCTCCAGATGGAACCTGCCTCCTTACATCCCAT GACGATGCCCATTTTCGTCTCTACGAACTACCTAATGATGTAATGAGATT TCTTTTAGACCTAAGTATGCCTACTCAATATTAATTCTCTTTTTCATTGT AGCCTCCTCTTCCGGAGCTCATGAAACCTGTTTTGGACATTCCCAAAACG GAGTGTATCTACAGTATGGATTGGTATCCCAAGATGTCTTCCATGGACCC TGTGACGTCTGTTTTCCTCTCCACGGCCCGTGCATCTCCCATTCATTTAC TTGATGCATTTAATGGATTTATTCGAGCCACATATCGTTGCTATGATGAA GCAGATGAGGTCACTGCAGCCATGTCGGTCAAGTTTGATCGGACAGGAGG ACGTATATATGCGGGGTTGACTACAGGGAGAATTGATGTCTTTGATACGG CCATTCCTGGAAGAGATCCGCTTCTACGATATGGAAAAGGACAAATTGGC TTAGGAATGTTGAGTTCCATTGATTTAATTTTTTGTTTGTTTGTGCATAC ACGACTCAAATTACTTTTTTTGTTTTTTTTTTGCAAAAATGTTCGTTACA TACCCCTTAAAAATTAGCATTATTAAATAATTTAAGATTTCGTAAAACAT TTGTAAATATTTTTTATATTATTTTTTAACTTGACATTGAACCGCGCAAT TAATAAAAAGATAAATTCACTCTATTTTTGCAAAAAAAAAAAAGAAAAAA AGAGAGATAAGAATCAATTATTTATTTAAATAGTATGAATAAACACTAAC TTWTTTTTATWTCTTATRGGCCGTGNCATAATATCWTGTATTGTATCGCW TCCTKTTKTTTCYTTTTTWTTYSCTGCCANTTMANACAAYCGARGGSCTG CCATATATGACACTCGAAAAAAGAGCCCGNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTTACTGGA GGMCGAAAAAATAATGAAATCGTAGTTTGGGATCTACGAAATCCCGGAAA ACTCTTTGGTATACTCAAAAGAACCGTTGAAACCAATCAACGCATACATT TCCATACTCTTGATAATGACTTGGTTATTAGTGGAAACACTGATGGATCC ATCAAGGTTTATGATCTTAAGTCTAGTCCTGTCATTGTAAACGATGAACC ACATATATATCCAATTTGGTCCCAAGACAATGTACATCAGGATAGTATAA ATTGTGTTCATGTTCATCCTTTCTTACCCTTGTTATCTACTACCTCGGGA CAAAGGATTTATTCGAAACCTTGTGACAACGAAGAAGAAGGCGAAGATGC AAAGAAAATTATACGAGATAACTCTTTAGGAATATGGAATATGAGCTTTG TC
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