EMLSAT00000003403, EMLSAT00000003403-699250 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003403
Unique NameEMLSAT00000003403-699250
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s187supercontigLSalAtl2s187:296091..300113 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003403 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003403EMLSAG00000003403-686169Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014842EMLSAE00000014842-723770Lepeophtheirus salmonisexon
EMLSAE00000014843EMLSAE00000014843-723771Lepeophtheirus salmonisexon
EMLSAE00000014844EMLSAE00000014844-723772Lepeophtheirus salmonisexon
EMLSAE00000014845EMLSAE00000014845-723773Lepeophtheirus salmonisexon
EMLSAE00000014846EMLSAE00000014846-723774Lepeophtheirus salmonisexon
EMLSAE00000014847EMLSAE00000014847-723775Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776017auto776017Lepeophtheirus salmonispolypeptide
EMLSAP00000003403EMLSAP00000003403Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003403

>EMLSAP00000003403 ID=EMLSAP00000003403|Name=EMLSAP00000003403|organism=Lepeophtheirus salmonis|type=polypeptide|length=995bp
MSRFCRQRLYSTIPRVGEFIEKIKSSFLQDPGKYLHEINRTRHEILGPMY
LERIGPDVDALFIADPEIVRKIFSLESKYPKHFIPQAWSVYGDMRNRKRG
LFFLDGPEWLRMRRXLXPILLNNDSVHKFVPFFEKEARRFLNNVEANSSP
PPSNSSQKYGTFKNLPIELHRWSVRSILAVIFGDSNILSEEEEEGLIEDV
QIIFDISARLQFTSALESCRQNTPDWIBFSSAADRVFELLNKSIKNTNVN
SKSLSGVLISQGVSYEDVERIAMDFVIAAVDTTSISTLWILHLISQDTYI
QNEIRISFDNQLLRNCMREASRLYPVSPFITRVLDKDILIEGSKLRTGQL
ILFSIYTMSRNPNYFTKPEHFLPQRWDITPSSFASIPFGFRARSCIGKKL
AELSMETLIKGLIQRYKIHCLNYEKAEMIMKFIGLPDRTIKIGLEHIGIP
RPTFNVEPKSFSTKKERSTPSFRPPPKPPSKTCPPVSRIFSNRPDFYRAQ
SITFLASPDGSLTGTPLLSXSHYDENKKLSYFEQAFEIKEKIGAGFFGTV
YKVRSKQDGLEYAVKIAQESYRGRSDRARKLEEVRKHQFLLPHSNCVHFY
QSWEEKGRLYQQFELCEKSLQEFADEDHDIPESQIWDYLVDLLLAVKHLH
EHDLIHMDIKPENIFIGRDGICKLGDFGIVIDLAKNDSSNHAVEGDPKYL
ATEVLARNYSKAADIFSLGVTMLEVACDLDLPKQGALWHKLRNDGPDPSV
TVRISSELKRIIQLMMIKDPNRRPTVESLLNLPSVKSALKRRRRKLMVIH
TFSYLKSLLEPIWRFFKTFLMFLSLPFLILWRYILSTSWIYNYRHLETPS
PMIRSYSKSQANGAFSSDEDEMDHSHLSSSTQSSLASPIQDDVEFYIDTP
QKMEVSPHKPFKKTFFGRQTQSTPGNLRYRSRYLNQPNYESGLCSPKRLF
ADNSNDSTQPSFEVSTEIDDHLNSKFKVRPTVLAERFDALDDSDD
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mRNA from alignment at LSalAtl2s187:296091..300113-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003403-699250 ID=EMLSAT00000003403-699250|Name=EMLSAT00000003403|organism=Lepeophtheirus salmonis|type=mRNA|length=4023bp|location=Sequence derived from alignment at LSalAtl2s187:296091..300113- (Lepeophtheirus salmonis)
ATGAGTCGCTTTTGTCGTCAAAGATTATACTCAACAATTCCTCGTGTCGG AGAATTTATTGAAAAAATTAAATCATCTTTTCTTCAAGATCCTGGTAAAT ATTTGCACGAAATAAACCGAACACGGCATGAAATACTGGGACCCATGTAT TTAGAAAGAATAGGCCCTGACGTTGACGCGCTGTTCATTGCCGATCCAGA GATTGTTCGAAAAATATTTTCTTTGGGTGAGAATATCTAAAAATAAGTAT ACTGGGCCAAACTTCAAAAATATTTTGTACGATTGCTTAGAGTCAAAATA TCCCAAACACTTTATTCCCCAGGCGTGGAGTGTATATGGCGATATGAGGA ATAGAAAACGAGGTTTGTTTTTCTTAGATGGACCTGAATGGCTTCGAATG CGGCGGGKTCTTWATCCTATCCTTTTAAATAATGACTCTGTTCATAAATT TGTACCTTTTTTTGAGAAGGAAGCTCGAAGATTTCTTAATAATGTAGAGG CTAATAGCTCCCCTCCTCCATCAAACTCGTCTCAAAAATATGGTACATTT AAAAATCTCCCAATAGAATTACACCGTTGGTCAGTCCGGAGCATTTTAGC GGTCATTTTTGGAGATTCGAATATACTGTCAGAAGAAGAAGAGGAAGGTC TAATTGAAGATGTTCAGATCATTTTTGATATAAGTGCTCGTTTACAATTT ACGTCTGCTTTGGAGTCTTGTCGACAAAATACTCCAGATTGGATARATTT TTCAAGTGCTGCGGATAGAGTTTTTGAATTACTTAATAAATCCATAAAGA ATACAAATGTCAATTCAAAATCACTATCTGGAGTGTTAATATCCCAAGGT AAGTGAATCATCAGCAATTGTAGAACTTTGATAATCCACATTTTGCACCT TTAGGAGTATCTTACGAGGATGTAGAAAGAATAGCAATGGATTTTGTCAT CGCTGCTGTAGATACAACCTCAATAAGTACACTATGGATACTTCATCTCA TCTCTCAAGATACTTACATTCAAAATGAAATTCGAATATCTTTCGATAAT CAATTGCTTCGTAACTGCATGAGAGAAGCATCTAGACTGTATCCAGTTTC TCCCTTCATAACAAGAGTTCTGGATAAAGATATTTTAATTGAAGGATCAA AATTGCGGACTGGACAATTAATCCTATTCTCTATTTATACTATGAGTAGG AATCCAAATTATTTTACCAAGCCAGAACACTTTTTGCCACAAAGATGGGA TATTACACCCTCATCATTTGCAAGTATTCCCTTTGGATTTAGAGCTAGAA GCTGCATTGGTAAAAAGTTAGCTGAACTTAGCATGGAAACTTTGATTAAA GGACTTATTCAGAGATATAAAATACATTGCTTAAACTACGAAAAAGCCGA AATGATTATGAAATTTATCGGACTACCTGATAGAACAATTAAAATAGGAT TGGAACATATTGTTTAATCTTTCTGCCGGCATTATTTTAGTTTCGTTCAT TCTTTTTATTTTATGGATARCTTAGTCATATCATCCAATTTTTATTGGAT AAAATTGTCCATCCMGTTTCATATGATATCCTGATGTTGGGATCCCTGAT AATTATTGTTTGCTACTAGGCCAATGTATATCTTTCAATATTACTAATGG GCAAAGCTTTAAAAAAATAATAGAAAAATCAGGAATCTAATGTATAAATA GACTTAAATATAAATAATTAACTTCGTAGACCTGAAGTTTGTCTCTTTTA GGGCACTAATGGGACAATTGTCTTAAATACTAAGTCTATCGTCCCTAATA GAGGGTCATATAGCTCACAGCAATAAATTCTAAGTAGACGCCATTTGTCT ATTAGTTATAACAAAGGTATTTGAGAATTGGCGCCATTTAGAGTATGACG TATCAATGAGGGATAATTAGACCCTATTAAGTAAACAGAGACTTGGATTA TTATAATTAATCCAACTGAGAGTTGAATAGAGTCATTTTAAGGAGGAATC ACAAATAAATATAATAAATAGTTTGTAATGACGAAGTAATGTTTTGATTA TTATTATTTTGAAAGGGCAGCTAGAAGTGAGAGCCCTACCCTGGCCTATG ACATCACAGCAGCTCATCCCCTGGTTGTGATTGCTCGCACCTATTGGAGA AATTTCAAAAAGTGATTGTCCAACCGGAGTAAGAAGAGAATGAGTATGAC GGCGACATTGAGCTTGGAATCCCGGTCATCAACACCCGTCAAGGGTATTC CTCGCCCTACGTTTAACGTCGAACCCAAGAGTTTTTCGACCAAGAAAGAG AGATCCACTCCTTCATTTCGTCCTCCACCGAAGCCTCCCTCTAAGACTTG TCCTCCAGTTTCAAGAATCTTCTCCAATCGTCCTGACTTTTATCGAGCTC AATCCATAACTTTTCTGGCCTCTCCGGATGGGTCCCTCACGGGGACACCT TTGCTCTCAGMCAGCCACTACGACGAAAACAAAAAACTCTCTTACTTTGA ACAAGCATTTGAAATCAAGGAAAAGATCGGAGCTGGCTTCTTTGGAACCG TCTACAAAGTTCGGAGTAAACAAGATGGACTCGAATATGCGGTGATTTCT TAGAAATGTCCCATCAAATAATTATAGTTATAATGAATCTAATTCCTTTA TTGAATGCTTCGTTCTAGGTGAAGATTGCGCAAGAGTCGTATCGTGGACG CTCGGACAGAGCTCGTAAATTGGAAGAAGTCCGGAAACATCAATTCCTTT TACCTCATTCTAATTGTGTTCATTTCTACCAGTCCTGGGAAGAAAAAGGC CGACTATATCAGCAGTTTGAACTATGTGAAAAAAGTCTTCAGGAATTTGC AGATGAGGATCATGATATMCCAGAGTCACAAATATGGGACTATCTTGTTG ATCTTCTCCTAGCCGTCAAACATCTCCATGAGCATGATCTCATTCATATG GATATCAAACCTGAAAATATTTTCATAGGTCGTGATGGAATATGCAAATT AGGGGATTTTGGTATTGTCATCGATTTAGCTAAAGTAACCTCCTACATAC ATATACATAATATTATGTTAACGTCACATGTTTTTTTCAGAACGACTCTT CAAATCATGCAGTTGAAGGGGATCCTAAATATTTAGCCACAGAAGTCCTT GCTCGTAATTATTCCAAAGCTGCTGATATATTTAGCCTGGGTGTTACCAT GCTGGAAGTTGCATGTGATCTTGATCTTCCTAAACAGGGGGCGCTTTGGC ACAAACTCCGAAATGATGGCCCTGACCCCTCCGTCACTGTTCGTATTTCA TCAGAGCTTAAGCGAATCATTCAGTTAATGATGATAAAGGATCCGAATCG CCGTCCTACAGTAGAAAGTCTTTTGAATTTACCTTCAGTCAAATCCGCTC TCAAAAGGAGGAGGAGAAAGTTGATGGTCATTCATACTTTTTCCTATTTG AAATCCCTACTAGAACCCATTTGGCGTTTCTTTAAGACTTTTCTAATGTT TCTATCTCTTCCTTTTCTAATATTATGGAGATATATCCTTAGTACCTCTT GGATTTATAATTACAGACACTTAGAAACTCCTTCTCCTATGATACGATCC TACTCCAAAAGTCAGGCTAATGGTGCATTTTCTTCGGATGAGGATGAAAT GGATCACTCTCATTTATCTTCATCAACTCAAAGCTCACTTGCTAGTCCTA TTCAAGATGATGTAGAGTTTTATATCGATACTCCTCAAAAAATGGAAGTG TCTCCACATAAGCCATTCAAAAAAACATTTTTTGGTCGTCAAACCCAAAG TACTCCCGGGAATCTCCGTTACAGATCTCGATATCTTAATCAGCCAAATT ACGAGTCAGGCCTATGTTCACCAAAGCGATTATTTGCTGATAATAGTAAT GACAGTACGCAACCAAGTTTTGAAGTAAGCACTGAAATAGATGACCATCT CAATTCCAAATTCAAAGTGAGGCCCACTGTCTTGGCCGAAAGGTTTGACG CTTTAGATGATAGCGATGATTGA
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