EMLSAT00000003420, EMLSAT00000003420-699267 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003420
Unique NameEMLSAT00000003420-699267
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1882supercontigLSalAtl2s1882:908..1751 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003420 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003420EMLSAG00000003420-686186Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014893EMLSAE00000014893-723821Lepeophtheirus salmonisexon
EMLSAE00000014894EMLSAE00000014894-723822Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768108auto768108Lepeophtheirus salmonispolypeptide
EMLSAP00000003420EMLSAP00000003420Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003420

>EMLSAP00000003420 ID=EMLSAP00000003420|Name=EMLSAP00000003420|organism=Lepeophtheirus salmonis|type=polypeptide|length=107bp
MKDQRQKKKETFALHKKVNKTLRDYAEVSTGHGMRYIFEHEGNGFTHFIW
ATMVIGFIVISSIISKNAYDDWENNPILXSVATTGLPIEKIQFPAITLCN
QVRQRSY
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mRNA from alignment at LSalAtl2s1882:908..1751+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003420-699267 ID=EMLSAT00000003420-699267|Name=EMLSAT00000003420|organism=Lepeophtheirus salmonis|type=mRNA|length=844bp|location=Sequence derived from alignment at LSalAtl2s1882:908..1751+ (Lepeophtheirus salmonis)
TCTGGCTGCTTTGTGTCCAAAGTTATCAAGAAAGGCGGATTTCTTTATAA
ATAATAGGGTTATAAATAAATAGGGTTTTACCCCATCTCGTTTGTTTGTT
CTTTACAGATTTTTCTAATTTATTTGGACCACCCTGTATAATTTCAACCA
GCATTATATCCATTTCTACAAAAAGCTTTCAATTATGGTGTTAATGATAT
TCAACATGCTAATTAATGATCTTTACTAATTGTTATAATAAGCCATTAAT
TATGAAACAAAATGTTTGTTAAAAATTAACGTTGAAGTAGGTAGAGACGA
TATTATAATAAATAATTACAGAATGGTTAGATATTAATGAAACACAAAGC
AGTAACGAATTCTTGCTCGAGCTACAGGAGTGGGGAAAGCAAACCTATCA
TGACATAATTATTTATACAAAGTTGTGTGTTATTTTACATTTTGATAACG
ACCATGAAGGATCAAAGACAGAAAAAGAAAGAAACTTTTGGTGAGCTATT
TCCTACAATATCTGAATTGACATATACATATAATTTGATTTCCTTATCAT
TATTTAGCCTTGCATAAAAAAGTCAACAAAACCCTCAGGGACTATGCTGA
AGTATCCACGGGTCATGGAATGCGTTATATCTTTGAGCATGAGGGAAATG
GATTTACCCACTTTATATGGGCCACCATGGTTATCGGATTTATTGTCATT
TCCTCAATTATCTCTAAAAATGCATATGATGACTGGGAAAATAATCCAAT
ACTTMCTTCCGTTGCAACAACGGGTCTTCCCATTGAAAAGATTCAATTYC
CCGCCATTACTCTTTGTAACCAGGTGAGGCAAAGATCCTACTAA
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