EMLSAT00000003436, EMLSAT00000003436-699283 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003436
Unique NameEMLSAT00000003436-699283
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s188supercontigLSalAtl2s188:590239..593342 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003436 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003436EMLSAG00000003436-686202Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014952EMLSAE00000014952-723880Lepeophtheirus salmonisexon
EMLSAE00000014953EMLSAE00000014953-723881Lepeophtheirus salmonisexon
EMLSAE00000014954EMLSAE00000014954-723882Lepeophtheirus salmonisexon
EMLSAE00000014955EMLSAE00000014955-723883Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778771auto778771Lepeophtheirus salmonispolypeptide
EMLSAP00000003436EMLSAP00000003436Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003436

>EMLSAP00000003436 ID=EMLSAP00000003436|Name=EMLSAP00000003436|organism=Lepeophtheirus salmonis|type=polypeptide|length=358bp
MTMVRFRRNHLFPRQVSDIGAFLFVSFMIPCSYFYETLIVVPSLYSQSSV
MFYIHNLLGIFILMNLLGNFLGLWLIDTSTRFVVLPTVIRKKWNFCAACE
AVTPPRSFHCSVCNTCILKREHHCMFVGYCVGHRNHRYFCLFLFYMFISV
AYCTYFNTSFLHQQILLDESGNLTWAQIFKFVFPLVMLITGLDFSWLQFY
IFFWSVHTAALLLTGVLLIYHAHLVLRGRTTFENNRRINTYNIGAIQNLK
EVFGENWKVILINPFMKSKLPHDGMEWDTYETWKNNHMYSSPTTTSGVYS
DPYSGSYGEDDNNRTTENEIPLFNHRNPRDWMHKRAAYLMHFFFVNLLFY
HQQSHELQ
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mRNA from alignment at LSalAtl2s188:590239..593342-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003436-699283 ID=EMLSAT00000003436-699283|Name=EMLSAT00000003436|organism=Lepeophtheirus salmonis|type=mRNA|length=3104bp|location=Sequence derived from alignment at LSalAtl2s188:590239..593342- (Lepeophtheirus salmonis)
ATGACAATGGTCCGGTTCCGTCGTAACCATTTGTTCCCTCGTCAAGTCTC
CGATATTGGGGCCTTCCTTTTCGTTTCCTTTATGATCCCATGCAGTTATT
TCTATGAAACCCTCATTGTGGTTCCTTCTTTGTACTCACAGAGCTCCGTC
ATGTTCTATATCCATAATCTATTGGGGATTTTCATACTTATGAATCTTCT
TGGTAATTTTCTGGGACTATGGCTCATCGATACTTCTACTCGCTTCGTGG
TTCTTCCTACAGTCATTCGAAAGAAATGGAATTTCTGTGCTGCATGTGAG
GCCGTCACACCTCCAAGGTAAAGAGAGATACAAAATTATTACTTATATGT
ATGGATATTCATATTTATAGATCCTTCCACTGTTCCGTCTGCAATACTTG
TATCTTAAAACGAGAACATCATTGTATGTTTGTGGGTTACTGCGTGGGCC
ACCGGAACCACCGCTACTTCTGTCTCTTTCTTTTCTACATGTTCATTTCT
GTGGCCTACTGCACTTACTTTAACACATCATTTCTACACCAACAGATCCT
CCTGGATGAATCAGGGAACTTAACTTGGGCACAAATCTTCAAGTTTGTCT
TCCCTCTTGTCATGCTCATCACTGGACTTGATTTCTCCTGGCTACAATTC
TACATTTTTTTTTGGAGTGTACATACTGCAGCCCTACTTTTAACTGGTGT
TCTTCTCATTTATCATGCTCATCTGGTCCTACGAGGACGAACAACATTCG
AGAATAATCGAAGAATCAATACCTACAATATTGGGGCCATTCAAAACCTG
AAGGAGGTTTTTGGAGAAAATTGGAAAGTAATACTAATTAATCCTTTTAT
GAAGTCAAAACTTCCTCATGACGGCATGGAGTGGGACACTTATGAGACCT
GGAAGTTGGAAGGACCTAAGAACAGATGAGGATTGGAAATGACTTCCCTT
TTACCGGAAGAAGGGGAAGTCAAGAGGAGTAAATATATGTACAACTCATA
TAACGATATCCGGTTTGCCTATAGGAACAATCATATGTATTCTTCCCCTA
CGACGACTTCTGGTGTATATAGTGATCCTTATAGTGGTTCTTATGGGGAG
GACGACAACAATAGGACTACTGAAAATGAAATTCCGCTCTTTAATCATCG
CAATCCTAGAGACTGGATGCACAAGAGAGCTGCTTATTGTAATAACTCCT
CTAAAACTAAATGAACTCACGTCTCTTAGACGTAGAATGTTATATGTGAT
TAGTACTCAAACAAACTCGTATATGAACGTCATAAATCCATTGCTAATTA
ATTAAGATTGTACACTCTGTATATATCAAGGGATATATCAAAATAATTAT
ACTTGTGAGATTGAAAATGGGCTCACATTATGTGTATAAATGTACATACA
TACTAATAAGTTATAACCTAAAGGTGAGTTTCCTCATTTATCATGCGTGT
ACTGTATACGTAAATGAACCTTTTTATTTTTTGTTTGAAATTTATAATAT
GCATTTTTCTTAAGAATAAGATACCGTACATTGGTTTATTCCAAAATTAT
AGAAGTTCTGTGGTATTTTTAAAAATCTGTTTTTCTTGCCCAGTAGTCGG
TACGAGACATCAAATTGAAAATTCTAGCAAGCCTGATTACATTATGGTCT
AACTTTGTATTTCTATTAACCTTGGGTTAGACCATAATGTAATCGGGKTT
GCTAGAACTTTCAATTTGATGTATCGTACCGACTACTGGGCAAGAAAAAC
AGATTTTGACAAACACGCAACCATTCATAGTTTATGATATTACTATTGCT
TTAATTTTCAATTTAAAGTACCGACTGCTGGACAGGAAAAACAGATTTTG
ACAAAAAACGCAACCACTCATATAGTATGACGTCAATATTAAAAGCGTGG
GGGAAGTCAAACATATGTCGTACATGCGTTATGGTTCACTCCAACAAACA
AGAAACGTTTTCAATCAGATATACAATAAAACTGGACAATAGAGTGATAA
AGTTTTGACAGGGGATAAAGGGCGCTTGGTACTTTTGCTTTGAAGACATT
TTGACCAAGGATATTTTCCCTTAATATATAAATTATGTTTATTTTTATTG
AAATTGATGATCCCTTTGAATTTATAAATCAAAATATATAATATTTATTT
ATTCAAAAAATATTGAATGGTTCTTATGAAGCAAGAACAGTGATTTCCAC
TTCGTTGTGATCCAGAATGTGTCAGAAGAAGTGGCGGMTGGSTGYAGMGA
GGSAAACCACTGAAAGGATTCGGGAAAGCACTCAAAGGTTGGGTGATAAT
TATCAGCCCGCGGCCTCTTCTTCTGTTACATTCTGGATCATAACAAAGTG
TAAATCACAGCTATTGTCTCATATTATGCTTGTTCGTAATAATAATCCAT
GATGTAAAACAATAATTGATAACGGAGACTTTCCTTGTGATAAGCACTTC
TTTCGTTTGAAAAGCCGTCATATTATTTTATTTTTCTTATTATTTTGTCT
CTAGTATGGTTTGAAATTTTATACCCTCTTTATTCCAACAGAAAACCACA
AATCACTGATTTTTATTGTATAAACACTACATATTTGAATTTAAAAATTC
AAAGTGCCCATAAATCTTCCCCAATAGCGACGTATAAACCTCATTTATTT
ATATATTGGGGGGAAATAGTTTAAGGTGAAAGTACCGGACACCAGTTTAA
AGGTCAAATCCATTTATTTATTGATCCCATTTTGACAGACGCAACATTCA
TTGCTATAAATCTTGGTTGTATTGGCCCCCTATTAACAATGCTGACGTCA
CGTGTACATGCTCTATAGCCTATAACTTTCAACTGATGAACCCAGATATG
GGGAAAAGCTAGAAAATCGATAGTTGATAACAGAAGACATAGTAAATTTG
TTGGTCGTGAACTAACCAATTAAAAATAATTATTTCTAGTAAATTCTTAA
AAATAAGGTGTCCATTCCACGTTGTATACGAAAGTACACGGACAAAAAAT
GTGGAAACTAACTTAAGTAACCTTTCATTCCATTCTATTTAGTGATGCAT
TTTTTCTTTGTTAATTTACTATTTTACCATCAACAATCCCATGAACTTCA
GTAA
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