EMLSAT00000003438, EMLSAT00000003438-699285 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003438
Unique NameEMLSAT00000003438-699285
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s188supercontigLSalAtl2s188:611660..614002 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003438 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003438EMLSAG00000003438-686204Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014958EMLSAE00000014958-723886Lepeophtheirus salmonisexon
EMLSAE00000014959EMLSAE00000014959-723887Lepeophtheirus salmonisexon
EMLSAE00000014960EMLSAE00000014960-723888Lepeophtheirus salmonisexon
EMLSAE00000014961EMLSAE00000014961-723889Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778892auto778892Lepeophtheirus salmonispolypeptide
EMLSAP00000003438EMLSAP00000003438Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003438

>EMLSAP00000003438 ID=EMLSAP00000003438|Name=EMLSAP00000003438|organism=Lepeophtheirus salmonis|type=polypeptide|length=668bp
MSTTEGAPTAAXRRQXAXRAKILRNKDNRLGHVLGNVSRDEINTGTGNEE
LEPVRMRATPLRRIQDEAVTPVPLSTPPPSIFNLSGNNQVAPGVEAPTVN
ERLICCGWXLSGLLTRLLLHFFPNLNAFIIFSITAFSVQTLRLIDLRASS
NSNVSLLRLAGLIFLDSRTNDKYHFNLSLILQLFIYYYYSSAPMFWEVTI
ALSCVKILFLHTYHSTDFEVHRNWLAVTHSLPIQQWYTDSCSEWTLDYPP
FFAYFEWVLSHFAYAFDPEMLRIKNHYYASNETVLFQRGSVIFTDFVFAM
GVKRCGGEYLGILANAGLLLVDHIHFQYNGFLFGLLFLSMGYAKNEQLLA
SGFWFAVLCNFKHIFXYXXPAYVVYLFGTYCFQSGHFKLDKLLILGLTVI
SVCVMSFGPFIYFGQFATVLLRLFPFKRGLVHAYWAPNFWALYNFLDKTI
SVILRVPTKASMTGGLVQEXSHTTLPSIPPSVTLIATLIFMMPCLWKLWK
NVNHNRFLGAIVLCSWSSFLFGWHVHEKAILLIILPLALLAYSDRSYSKI
YFITSVVGHFSLFPLLFESREIWIKLLVFLCHAAYTYNSLLSTSNKIGKR
AAIKNSLSPLEKLYLLGLALVFIFKSLIFHNFPSLSKYEFLPLMFYSVYC
GVGITYSWVLMNNQYLLS
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mRNA from alignment at LSalAtl2s188:611660..614002-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003438-699285 ID=EMLSAT00000003438-699285|Name=EMLSAT00000003438|organism=Lepeophtheirus salmonis|type=mRNA|length=2343bp|location=Sequence derived from alignment at LSalAtl2s188:611660..614002- (Lepeophtheirus salmonis)
ATGTCAACAACAGAAGGGGCTCCAACTGCTGCCGAKCGCCGRCAAKAAGC
CANCCGAGCCAAAATCCTTCGAAATAAGGACAACCGATTGGGCCATGTGC
TGGGAAATGTTTCTCGAGACGAAATCAATACTGGAACTGGAAACGAGGAA
CTTGAACCTGTGAGGATGAGGGCAACTCCATTACGGAGAATACAGGACGA
AGCGGTGACTCCTGTGCCTCTCTCCACTCCTCCTCCTTCAATCTTTAATT
TATCCGGGAACAACCAGGTGGCTCCTGGGGTTGAAGCTCCAACTGTAAAT
GAGAGACTCATCTGCTGTGGCTGGSTCCTCTCCGGACTCTTGACTCGACT
GCTCCTCCATTTCTTTCCCAATCTCAATGCCTTCATCATTTTCTCTATCA
CTGCCTTTTCTGTTCAAACACTACGCCTCATTGACTTAAGGGCTTCTTCC
AATTCCAATGTATCCCTTCTTCGTCTCGCAGGTCTCATTTTCCTTGACTC
CAGAACCAATGATAAAGTTTGCTCTTTCATTCAAATCATGCGTAATGTTA
TAAAGGCCTTTTCCATCTTTCTTTTTGCATTCATCCTTATGGACTCGATT
TTAGATTAATTAATATTGTTTGAACAAGTTTTTGTTTCCTTCCTTTAGTT
TTTTTGTAAATTATGTTCGTTGTGAAAATATAAACGGAATCTCAAATATG
TTAATTTGATCCCATAATTTTAATAGTATCATTTTAATTTATCTCTCATT
TTACAATTATTTATTTATTATTATTACAGTTCAGCTCCAATGTTTTGGGA
AGTAACCATTGCACTATCATGTGTCAAAATATTATTTTTACACACATATC
ATTCTACTGACTTCGAAGTTCATCGAAATTGGCTTGCTGTTACACACTCT
TTACCTATACAACAATGGTATACAGACTCCTGCTCTGAATGGACCCTAGA
TTATCCTCCATTTTTTGCCTATTTTGAATGGGTTCTCTCTCATTTTGCCT
ATGCCTTTGATCCGGAGATGCTTCGAATAAAAAATCATTACTATGCCTCT
AACGAAACAGTTCTTTTTCAAAGAGGATCCGTCATTTTTACGGATTTTGT
ATTTGCAATGGGTGTTAAACGTTGTGGAGGAGAATATCTTGGGATATTAG
CGAACGCCGGACTTCTTCTTGTGGATCATATTCATTTTCAATATAATGGA
TTCCTCTTTGGACTTCTCTTCTTATCCATGGGATATGCTAAAAATGAACA
ACTTCTGGCATCAGGTTTCTGGTTTGCGGTTTTATGCAATTTTAAACACA
TTTTTGRTTATKCTSCKCCAGCCTATGTGGTTTACCTTTTTGGGACATAC
TGCTTTCAATCGGGTCATTTCAAGCTTGACAAACTACTCATTTTAGGTAG
ATATATATTTTTTAAATACAATAGTTTTATCCAATGCTATGTTTAATCTT
ATGATGTAGGTTTGACTGTGATATCCGTTTGTGTGATGTCCTTCGGTCCC
TTTATATACTTTGGTCAATTTGCCACTGTTCTTCTAAGGCTATTTCCATT
TAAAAGAGGACTTGTCCATGCTTATTGGGCCCCTAACTTCTGGGCTTTGT
ATAACTTTTTAGATAAAACAATATCTGTAATTTTGAGGGTGCCTACAAAG
GCTTCAATGACTGGTGGMCTTGTTCAAGAGMATAGTCACACCACTCTTCC
TTCCATACCCCCTAGTGTCACTTTGATTGCTACTTTAATATTTATGATGC
CCTGCTTATGGAAACTTTGGAAGAATGTTAATCACAATAGATTCCTCGGT
GCAATTGTATTATGCTCATGGAGTTCATTTTTATTTGGATGGCATGTTCA
TGAAAAAGCCATACTTTTAATCATATTGCCACTTGCTTTATTAGCCTACA
GTGATCGGGTAATGTAAATAATCCTGTTTATAATTATTAAACTATAATAA
TAGTTAATTTTTAAATTATAGAGCTATTCCAAAATTTACTTCATCACGTC
CGTTGTGGGTCATTTCTCCCTGTTCCCGCTTCTATTTGAGTCAAGAGAAA
TATGGATAAAACTACTAGTTTTCCTCTGTCACGCTGCATATACATATAAT
TCTCTTTTAAGCACTAGTAATAAAATTGGCAAAAGAGCTGCAATCAAGAA
TTCACTTTCTCCTCTAGAAAAACTTTACCTCTTAGGTTTAGCTCTTGTCT
TTATCTTTAAATCCTTAATCTTTCATAACTTCCCTTCTCTTAGTAAATAC
GAATTTCTACCCTTAATGTTTTACTCTGTTTATTGTGGGGTTGGAATTAC
ATATTCTTGGGTTTTAATGAACAATCAGTATTTATTATCATAA
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