EMLSAT00000003449, EMLSAT00000003449-699296 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003449
Unique NameEMLSAT00000003449-699296
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s188supercontigLSalAtl2s188:708922..714137 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003449 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003449EMLSAG00000003449-686215Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015024EMLSAE00000015024-723952Lepeophtheirus salmonisexon
EMLSAE00000015025EMLSAE00000015025-723953Lepeophtheirus salmonisexon
EMLSAE00000015026EMLSAE00000015026-723954Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779417auto779417Lepeophtheirus salmonispolypeptide
EMLSAP00000003449EMLSAP00000003449Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003449

>EMLSAP00000003449 ID=EMLSAP00000003449|Name=EMLSAP00000003449|organism=Lepeophtheirus salmonis|type=polypeptide|length=225bp
MWLLSNMTSLHLQILDVYPSTKESSMEDSFLHHRNSSSNSSNSPATTGAG
VVSLSTSSGRSITPTMTISTSSKSSTSSTNSSATTGSTMHVEKKRGPIRP
SGSTRQNIDNQRIPGSGNIKSSKDGSGLSSEKRRKFAVDQIIKPPPLSTF
NSVFKKNGNPLKWSVQQVCDFVKSLHGCAEYVEDFMLQEIDSQALMLLKT
EHLMXAMSIKLGPAVNEMREEIKEN
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mRNA from alignment at LSalAtl2s188:708922..714137-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003449-699296 ID=EMLSAT00000003449-699296|Name=EMLSAT00000003449|organism=Lepeophtheirus salmonis|type=mRNA|length=5216bp|location=Sequence derived from alignment at LSalAtl2s188:708922..714137- (Lepeophtheirus salmonis)
ATGTGGCTCCTTTCAAATATGACAAGTCTGCATGTAGAATGAAAACAGGC
CCTGAGGGATTATAGAGTAGGGGTCTCTAGGGTGAGTGTGTCTACGGAGA
CACGTTCCATGTAGAAAATTTATAAATAAAAATGTGGATTTTGTAGAAGT
AGAAAGAGATAAAGAGCGCGAGGATCAAAGTTATTTATTTATCGCGCTTG
TGTGGAACGTCGTCGTGGAAGTTCCATGACTACTACAAACATTCTCTCTC
TTTACACATAAATGCATAATAGGTAAGGTTGATAATTTTGGTAAGGATAC
AAAAGCGTGCGAGGAGAAGGGAAGAAATACTTATGGCATCATTGATTAAA
TAATATACATCTTCTTCTATCAAGAACATTATCATTCCCGCCTTTATTAT
TCAATATTAATATAATATTAGATGCTGAATGTCGATAGAGAACTGAATAA
AATGCCTAAAATAACGTCGCCTTCTGTCTGGATTTCTGAAAATGGAGGCC
CAGGAATTTGAAAAATACTTACCAGATGAGAAACAGATGGTTTGTCGGAT
TTGTCGATATAAATGTGCCTTTAGCCCCCTGTCTAGAATTCCACGCCACT
CATTATCATCATCTCATATCAAGAGCATGGATATTCTTCTAAAAAATCAA
GTTAATGATGAATCCATCAAGTCAGACNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACTATCT
AACAGTAAGTATTCAAAAATTTTAAATCTAACCATAAAATATGATTCTAG
TTTAGCTAAACATATCAAGAATTATGATACACAACTAATTAAATGGCAAA
AACAGCTGCTTAAAAGGTCACAACAACGGGGGTAGAAGCTTTGGTTGGTT
TGCAACTAGTTTGTCTGACACTAGTTTCTTCACTTAAAKACTTGGGAATG
ATCATTAGGTTTTCCAATATTACAAAGTCAATAAATATTACTTTTTTATC
ACTTAAGGCTTAGCTATGGTTGATAAACTCCAAGAAAAGGTGTTCAGAAA
ACTCATAAAAGGCAAAAACAACTACTTAAATGGTCACAACAACGGGGGGG
GGGGGGGTAGTTGCATTGGGTGTAGTATTATAATTAGCAATTGTGTATAT
CCTTCATGATAAAAGTATGTTGTTATACAAGCATAAATAATGGGGGGGGG
GGGAAATCTTTTTTGATGCYCTTAATAAGGAGTAATATCCCCGGACATTA
CTACATAATTAGCTTTTGCTCTAAATCTTTAGGATAGATTTATTTCTAAC
ATTTTTTTTTGGTATATTTATTGTATAATTTTATGATTTTAACCTTTACT
TCATTATTTAATAATTATTTAGATCTCATCCGTTGAGATATATCTATAAT
GTACACAATTGTATATAGCAACTTGCACATTAGGAATAAACGGTGATGAT
CTTTTTGATTAAAATCCACGTTTGGCTTGTGTTTAGCAACTTAAAGTTAG
GACATATTTCTCTGAATTCATGTCAGAACAAGAAAATATTATTTGGATCA
ATCTATTATTTCAATATTCTGTATTTATAATTTATTGTTATTATTGGTTA
AATGATTACATTTGTCTAATTTTGTATATTTAACATAAATGTATGATGGT
TTATTTTTTAGTAGGTAGATTATATTTAATTTAAGCCTTCTTTTTAAGCT
AGGAATTTCAAATATATTACGAAATACTCTACTTTGTCGCTTCATTTTTT
ATTATTCTGAGAATAAGGTTCATAATGAATTACAATTTCATGGAGTGTGA
CGTTTTCAAATCTCGTAGTATATCTTCATTCAACATTTTGCTAATAAATA
CTTTCGTTATACCCTCAAAAATTATAATACAGCAGGCAGCTGATAATCAC
ATCATTATTTTAAACAATGATACCATAAGTATTTCTCCCACTCTTCTCCT
TGCACGCGTTTTTCTTTACAGAATTATCAACTTTAGGATGGATGTGTTTC
TAGTAAGAGGGAGGCATTTAATATTAATGGATAAGAAAGTTTGTCAAAAA
CTGTTTTTCTTTTCCCTTTTCATACCATAAGTAAGGGTGATAATTTTGGT
AAGAATAGAAAAGTGTGCGAGGAGAAGAGAAGAAATACTTATGGCATCAT
TGATTAAATAATATACATCTTCTTCTATCAAGAACGTTATCATTCCCCCC
TTTATTATTCAATATTAATATAATATTAGATGTTGATAGTCGATAGAGAA
CTGAATAAAATGCCTAAAATAACGTCGCCTTCTGTCTGGATTTCTGAAAA
TGGAGGACCAGGAATTTGGAAAATACTTACCGGATGAGAAACAGATGGTT
TGTCGGATTTGTCGATATAAATGTAGATTATATTTAATTAAAGCCTTCTT
TTTTAAACTTGGAACTTCAAATATATTTCCAAATACTCTACTTTGTCGTT
TCATTAGCTATTATTCAGAGAATAAGGTTCATAATGAATTACAATTTCAT
AGAGTGAGACGTTATAAAATCTACTATAACGGATAAAAACGTCCAAGTCA
ATTATACGTAGTATATCTTCATTAAACATTTTGCTAATAAATACTTTCGT
TATACCCTCAAAAATCATAATAAAGCAGGCAAATGATAATCACATCAGTA
NNNNNNNNATCACATCAGTATTTTAAAGAATGATACCATAAGTCTTTCTC
TCCCTTCTCTTTGCACGCGTTTTTCTCTACATAATTATCAACTTTAACCA
TAAGTAACTTAGTGGAGTGATGATGAAAAATGTAATGTACTATTACTCAT
GTTAGTTCATAATAATATATAAAAATATAGGGTACCTATTCTCTAGAATG
ACGAGGACAATTTATTGAAGCGTTCAGCTGATGAACAATAAAGAAACATA
AGGATCATTCAGTTATTATGACAACATAAGCCTTTCTGTTACGAATAATA
TTCTTAGAATCTGAATAAATTAATAATTAGTGATAAAATAACCTTCTAAT
TTTTACAAAAGGAGTTTTGTATTAGGTAAGTTTATTATAGTAGATATTCA
TTGGAACTTGATCCATTCTTATTATTTTAATCGTAGAGCCTTCCTAGTAA
ATCGTGGAAGATATGTGAACTTAACCACAATTATGTGAAAATGAGCTTAT
TTCCATAACTTTATAAAACAATCATGTTTGGCCTTTGGCATCCTTGTTAT
TTTTTACTTAATTTAATATTCCATATATTTATATTATAAGCATCTATTTT
TCAGATGTCCTAAATATCCAGCGCTTCTAAAGCAATGGATAGTAAACTGC
CGTCGGCAAGATTGGAAGCAAACCAAATGACCAAGGATATGTTTTAAGCA
CTTCAAGGACTCTAACATCATCACCCACAAAGTTTCAGTGCACTTAAAAA
AGTGGAGTCCATCGACGAATCTTAAAGCGAAGAACCTATGAAGAAGACAG
TACTTAAAAAAAGGAATTCTGAGGACTGTAAATATTGTCATTAATCATAC
ATATGATATGCCCAACCTAGTGCTATGGAATCCTTGGGGGTGTTGAAAAA
AAAAGCAAAAAGAGACATTATGATTTTTTTGGGAAAAAATGAACTTTTTT
TAACACATTTAAAGGCTTTAAAAATAAAATTATTTGTCAAAGAAAACGAA
GGCTTCAGAAACGGATAACCAATGCTACAGATTTATTTTGCCATTTAAGC
AAAAACTGTTGAGAAAATATGATCTTATAGATCACTAAGACCATGAAGAA
GTCCAACAAGGCCATGCACGTATTTCAGAAGGACGAAGCTCCGGCCCATA
CTTCTAATATTGTACAAGAGTGGATGGGTAGCAACATGAACTTCTGGTCC
AATAACCTTTAGCCCCTCAAAGCCCAGATCTGAATCCACAGTATTACTCA
ATTTGGTGGCAAATTGAGAAGGCCTGCAAAGRCCGCCATTCAGATATTGA
TGCCCTGAAGKCCTCCGTTAACCAGCAGTGGAGGATCATGAAAAAGGACT
ACGTTGCCAATGAGTGCAAGGGGTTATAGAGGGGGTTGGAATCTATCATT
AAAGCTGATTATTATAATTAATGTGCATTTTTAGAGTAAAAAATATTTTA
TAATAAAATTATCTATATACAACATCATCTTGATCAATTACGAGTATTTT
AATGACTACTTAGAGGCAGGMCTCAGTACTTTTTCTACACCCAGTATTAT
AGCTATGATTATGAAAAGAAAGACCGAAATCGATGGTGGTTTTTCGAATA
ATCATTACAATATTCTCTTTTTTTAAATTTTCTAGCTCCAAATCCTGGAC
GTGTATCCATCCACAAAGGAGTCTTCAATGGAAGATTCCTTCTTGCACCA
TCGTAATTCCTCTTCAAATAGTAGTAACTCCCCCGCTACCACTGGCGCAG
GAGTTGTTTCTCTTAGTACCTCTTCTGGGAGGAGTATTACTCCTACTATG
ACCATCAGCACATCTTCAAAATCAAGTACTTCCTCGACCAACTCCTCAGC
GACTACAGGAAGCACCATGCATGTGGAGAAAAAGCGTGGTCCTATTCGAC
CGTCTGGTAGTACGCGTCAAAACATTGATAATCAACGCATCCCTGGCTCT
GGGAACATTAAGAGTAGTAAAGGTATGTTGAAATATAGTTCTTGTATCAT
GAATTATTCTTAATTATTCATTGATTTGTTTTTGTTGGAAATATTCACCA
CATCAAAGATGGGAGTGGTCTATCTAGTGAAAAACGCAGAAAATTCGCAG
TTGATCAAATCATCAAACCCCCACCTCTATCTACCTTCAACTCTGTTTTT
AAAAAGAACGGAAATCCCCTCAAATGGTCTGTTCAACAAGTCTGTGATTT
CGTCAAGAGCCTCCACGGCTGTGCTGAGTACGTAGAAGACTTTATGCTCC
AAGAAATTGATAGCCAAGCTCTCATGCTCCTAAAAACAGAGCATCTCATG
SCTGCCATGAGTATTAAACTCGGTCCTGCTGTTAATGAAATGCGTGAGGA
GATCAAAGAGAACTGA
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