EMLSAT00000003450, EMLSAT00000003450-699297 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003450
Unique NameEMLSAT00000003450-699297
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s188supercontigLSalAtl2s188:819370..821796 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003450 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003450EMLSAG00000003450-686216Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015027EMLSAE00000015027-723955Lepeophtheirus salmonisexon
EMLSAE00000015028EMLSAE00000015028-723956Lepeophtheirus salmonisexon
EMLSAE00000015029EMLSAE00000015029-723957Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779837auto779837Lepeophtheirus salmonispolypeptide
EMLSAP00000003450EMLSAP00000003450Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003450

>EMLSAP00000003450 ID=EMLSAP00000003450|Name=EMLSAP00000003450|organism=Lepeophtheirus salmonis|type=polypeptide|length=252bp
MSLMRHIIQESSQPFPLEAGDDKAQNPGGVPKKEFSTEESFSHKHNSSSN
SISSPATTGTCVVSLSVSSGSSSTPIMXTTTATTSTKSSTSSTNSSVTTG
TTTHAEKKRGPGRPSGSTRQNIDNQRNPGSGNNQSSKGNSHHIKDGSGPP
SEKRRKLTDDPIIKPLPLPTSNSVFGKNGNPLKWSVQQVCDFVKSLHGCA
EYVEDFMLQEIDGQALMLLKTXHLMAAMSIKLGPALKICSAINEMREEVK
QN
back to top

mRNA from alignment at LSalAtl2s188:819370..821796-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003450-699297 ID=EMLSAT00000003450-699297|Name=EMLSAT00000003450|organism=Lepeophtheirus salmonis|type=mRNA|length=2427bp|location=Sequence derived from alignment at LSalAtl2s188:819370..821796- (Lepeophtheirus salmonis)
ATGTCATTGATGCGTCATATTATCCAAGAGTCCTCTCAACCCTTTCCTCT GGAGGCCGGAGATGATAAAGGTAGGTCATGAAGGAAATATTCTTTTAATY CATWACAACGGTGTGTTCAGTTTGTATTGATAATAGCAATTAGGCAGCGC CCTCCTCTCCTAAGTTGGGGTGTTTTGGGGATTCTGGGCTATGTTTCCCC TAGCAGTATTAATTATACTATATAACCAATGATGGTTACTTGTTCAAAGT ACTCAAGGTTGCGTGGTATCTCCCTCTTCTTCAAGAAAGGGAAAGTGAAC CAACAAATGTTGTAATAGTACATCTGTATTTGAAAAAGAGAGGAAAAAAG AAGTCTTTTTCAGACTTCTTTTTTCGCCCTATTCAATGATAAATTACATA TCTTTTTATTTTTCGTTGGATGAGAAGAAGTCCTTTTATATTTAATTATA TGTATATATTTGATGGATAGAAGGAAACATCCGGTGGTGGTCTATATAAT AGTATTATTAATATGAGGGCGTCAGAATTATGATGACATTTGAAGGGACA GAAAGAGCTGCTGGGCCTTCTTTTTTATACTAAACCTTCATCATTAAATA ATAGATTATGCTAATGTTCAACCTAGTTTAACTTATTTTAATATTAGGAA GAAATATTAAAATCTCATTGGATTTCACAGAATAATAAGTACCGTACGCG CTCACTTACTCCTTAAACGCGCCTGTAATTGAGAGAAGCAGAGAAGAATT CTCTATAATCTGGCAGTCAGCGCAACCATATAAACTCCTCCTGCTTTGTT CTGCTCTCCTAATATTTTATTCTGTATTTTACTTCTTCAAGCCTCACTAA GTGATGGAAGAATAAATACTCTTCTCTCATTGGAAAGCGCTTCTTCTACA AGAAGAATACAATAATAGCTCCCTCCCACTTTTCAAAATTTATTATTATC ATAATGTTGTTCCTTCCACATATCACATATGACAAGTCTGTTTATGTAGG ATGAAAATACGCCTTGAGGGCTTATAGAATAGACTCTACGGGGGCTGGGG GGGGGGGGGTGAGTGTGTCTACGGAGACACACTCTATGTGGAAAATTTAT AAATAAAAATGTGACCTTTCATGTAGAAAGAGATAGACCGCGAGGATCAA AGTTTCGAGCTTGTGTGGGACGTCCTCGACGTTGTACTTTACACATAAAT TAGGATGGAGTGTGTTTTTAATAAGAGAGAGGCATAATGTTGATTGATAA ATTTAATCATAATGGAAAGGAAAGTTTGTCAAAAACTGTTTTTCTTTTCC CTTTTCATACCATAAGAAGTAACTAGGTGGAGTGATGATGAAAAATGTCT AATCATGATTGACGGAGATCGAATTAAACCTCTTATTTATTTATTTCTAA TACGAAAAAAGCTCTTCCATTTCGTCATTCCTTCCCCTATAAGTTCAGTC TTTTCCTCTCCTTCTTGCCTGCATTAATGAAATTCCTTTTACTAGCTACT ACTAAAAGAGGGGAACCGTCCCTTACAAATCTTAATACAAACACAAACCA TTTCCAGATGTTTTCTTTCACAGAAGAAAAAAAAGTTTTTCTCCTAAACA AATATATGTACATAGATAATGGAAAGAAAGACTGAATAATTTTAACATAT TCCTTTTTTTTTATATCTTCCAGCTCAAAATCCCGGAGGTGTACCCAAAA AGGAGTTTTCGACGGAAGAGTCCTTCTCCCACAAACATAATTCTTCTTCA AACAGTATTAGCTCCCCCGCTACCACTGGCACATGTGTTGTTTCTCTGAG TGTCTCTTCTGGGAGCAGTAGTACTCCTATTATGKCCACCACCACCGCCA CCACATCTACAAAATCAAGTACTTCCTCMACCAACTCCTCAGTGACTACA GGAACCACCACGCATGCGGAGAAAAAGCGTGGTCCTGGTCGACCGTCAGG TAGTACGCGTCAAAACATTGATAATCAACGCAACCCTGGCTCTGGGAACA ATCAGAGTAGTAAAGGTATTTTGAAATATACTCATTGTATCTTGAATCAT TCTTAATTATTCGTTGATTTGTTTTTGTAGGAAATAGTCACCACATCAAA GATGGGAGTGGTCCACCCAGTGAAAAACGCAGAAAACTCACAGATGATCC AATCATCAAACCCCTACCTCTACCTACCTCCAACTCCGTTTTTGGAAAGA ACGGAAATCCCCTCAAATGGTCTGTTCAACAAGTCTGTGATTTCGTCAAG AGCCTCCACGGCTGTGCTGAGTACGTGGAAGACTTTATGCTCCAAGAAAT TGATGGRCAGGCTCTCATGCTCCTAAAAACAGASCATCTCATGGCTGCCA TGAGTATTAAACTCGGTCCTGCTCTTAAAATTTGTTCTGCCATTAACGAA ATGCGTGAGGAGGTCAAACAGAACTGA
back to top
Add to Basket