EMLSAT00000003475, EMLSAT00000003475-699322 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003475
Unique NameEMLSAT00000003475-699322
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s18supercontigLSalAtl2s18:1736812..1737369 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003475 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003475EMLSAG00000003475-686241Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015107EMLSAE00000015107-724035Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780864auto780864Lepeophtheirus salmonispolypeptide
EMLSAP00000003475EMLSAP00000003475Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003475

>EMLSAP00000003475 ID=EMLSAP00000003475|Name=EMLSAP00000003475|organism=Lepeophtheirus salmonis|type=polypeptide|length=185bp
MDNSNGNPLFGGISRYGSGASSLNPYLNVDPSYLQSNAPEYLFNQEESRG
SMEKSFTAIGASVISGSAVGCAGGIYQGVRQTALDGLTGAARRTQILNYT
IKSGGSVSNAFGSMAXIYSSLYALISIPYPEGDEYKSIVSGGLTGALYKS
SSGLKKCARATAFGVGLASLWSFVLKKDKNISNFI
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mRNA from alignment at LSalAtl2s18:1736812..1737369+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003475-699322 ID=EMLSAT00000003475-699322|Name=EMLSAT00000003475|organism=Lepeophtheirus salmonis|type=mRNA|length=558bp|location=Sequence derived from alignment at LSalAtl2s18:1736812..1737369+ (Lepeophtheirus salmonis)
ATGGATAACAGCAACGGCAATCCTTTATTTGGAGGCATTTCGCGCTATGG
CAGTGGAGCGAGTTCTCTCAATCCCTACTTGAATGTGGATCCCTCCTACC
TCCAGAGCAATGCTCCCGAGTATCTCTTTAACCAAGAGGAGTCACGTGGA
AGCATGGAAAAGTCATTCACAGCAATTGGAGCAAGTGTGATTTCTGGCTC
TGCTGTGGGCTGTGCTGGTGGAATTTATCAAGGTGTACGACAAACCGCTT
TAGACGGACTCACAGGAGCTGCTAGAAGGACTCAAATATTAAATTATACC
ATTAAATCTGGAGGCTCCGTGAGCAATGCCTTTGGAAGTATGGCGGKCAT
CTACAGTTCACTCTACGCTCTCATCTCAATTCCCTATCCCGAGGGGGATG
AGTATAAAAGTATTGTGTCTGGCGGTTTAACTGGAGCTCTCTATAAATCC
TCTTCAGGTCTTAAAAAGTGTGCGCGAGCAACTGCATTTGGTGTCGGACT
TGCTTCTCTGTGGTCCTTTGTCTTAAAGAAGGATAAAAATATTTCTAATT
TCATTTAA
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