EMLSAT00000003477, EMLSAT00000003477-699324 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003477
Unique NameEMLSAT00000003477-699324
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s18supercontigLSalAtl2s18:214560..217374 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003477 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003477EMLSAG00000003477-686243Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015110EMLSAE00000015110-724038Lepeophtheirus salmonisexon
EMLSAE00000015111EMLSAE00000015111-724039Lepeophtheirus salmonisexon
EMLSAE00000015112EMLSAE00000015112-724040Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774679auto774679Lepeophtheirus salmonispolypeptide
EMLSAP00000003477EMLSAP00000003477Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003477

>EMLSAP00000003477 ID=EMLSAP00000003477|Name=EMLSAP00000003477|organism=Lepeophtheirus salmonis|type=polypeptide|length=300bp
MSALLGPLLSSGDGGLTGATKAYDDPVIFRDDRVLDILMSKESNYVPAES
NYLSTGIQHEIKPHNRREVADWMLEICEDRGVSPEVFVLAMNYLDRFLSV
CTISKSQLQLLGAVCLLVSWKVREHRPLPASKLVEYSDFNLTLIDIMEWE
VLLLSKLDWDMSAVIASDFLEHIVQRLTILDVSSNLVHIRQQAEARILLC
SSHYEFSSINPSLIAIACVLASLEPHFGFRKENLLEFLKSIKSLDNKELI
HNLVSRIENLMKNYPLLSSDKSSASTSRNSEDLTTPTKLHDVVAKKYARH
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mRNA from alignment at LSalAtl2s18:214560..217374+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003477-699324 ID=EMLSAT00000003477-699324|Name=EMLSAT00000003477|organism=Lepeophtheirus salmonis|type=mRNA|length=2815bp|location=Sequence derived from alignment at LSalAtl2s18:214560..217374+ (Lepeophtheirus salmonis)
AATTAATTTACACCACAGATATGCGATAATTCTGTGGGATGGAGGCAATG
AGTCCTCCTTTTTTGGAATCAAAACACGATCATCCTTATTCTTCCCCCTG
AGTATCATCTGTACATAGAAAACATTTTATGTACATAATATGTAATTTGA
TAAAATGATTTAACTGTACAAATAAATGAACGTAAACATTTTCCCATAGG
GATCAATTGAATGTATGTAGATTTTTGATCATATGTAATATGATCCTACA
AAATTAATGAATCAACAGATATGTAAAAAAAAAAATGTAGAAAATTTCGT
TATGAATTTGATGTTGATCAAACATAAGCCGAGAAATATCCTTTTAGTCT
TGATTTAATTTGAACAAATAAAATGAAACTAATATTGTTAGGGCAGTTGG
GATTAAGGAATTTATTTCATTTTTTTCTTTTTTGGGCTCCAGGATTCATA
ATTGCATAATTGTGTTTTCCAGACATTGTGATGTGTATACTTTATACAAC
ATTTTATATACAGTCGAGGATCCGCAGACCTATTTTTCTTTCATTCCTAC
CCCCACATATATGGGGAGTGTGAGTAGTCTTCTTTTTATTTTAACCTGAA
GGTGTCGGGCAGGCATGCAAGTAGTTAATACATAGATGATGATGAAGCAT
ATTCAACAGTTGATCTTGAAAATACATACACAGCGAAGAAGGAGACATTG
AGGCACATGGCAGCAAAGAAGAATCCAGAGGACGTTGTGATCTCATTTAT
CAGGACGTTCCTTTTTTTTTTGGAGGGACAATACAAAGAGGAGGATTGTA
GACGAGGGCGCGCGGATGTGAAATTTCGTGCGCAGGAGCTCAAGGTTACA
ACTTTTCCGTTCCTACTACTACTACAGCAACAACAAAAACATCAACTTCC
ACCACCATCATCCTCAATAATAATAATAATGACAACAACAACGTCTCTCA
AGCACAACGATAATGGGAGACAATTCATAAAAAAAGAAGTGGCTTKCCTT
ATGCTACTCCACGCTAATTCACGCAGCGACTTCCTTTATTTCCAAATGGC
TAAGGCAGTCCTGACTAAGTTCAACTATTAAGTAAGTAAGACTATGTGTC
TGTTTATAAGCCAATGATAATTTAAGGAGTCCTGGCGAGTCTTTCAGTCT
CTCCTTGAAACTCCAGCTGGACGGAAATGGTATGAGGAGATGGAAAAGGA
AGAAAGAAGAGTCAAAGGTAAACAGCTAGAACGGTTTTAATATATAAATA
GAAAAAAGTTTCACTTTCTAGGTCAGGTACATGAGGTTTGTTTCAAACAT
ATTTTTTGATATTTATATGCAAAAAATAGTATATTTATACATACATATTC
AAGCACGTTTTCTACGCCCATGTACCTTACGCCAAAAAGTTCGTTAACTA
GTATTAAAAAAAGGACACGCGAATTTTCATGTAACTTCTCTTTATTTTCA
ACTCTTATTTAGCTGTAAATCTATTACGTTACAAACCTCATTGAATAAAG
AATCTCCATGTCTGCTCTACTAGGCCCATTACTATCCAGTGGAGATGGTG
GGCTCACTGGAGCAACAAAAGCCTACGATGATCCTGTGATATTCCGTGAC
GATCGTGTTCTGGATATTCTTATGAGTAAAGAAAGTAACTACGTTCCTGC
TGAGAGCAATTATCTCTCCACTGGGATTCAACATGAAATTAAGCCTCACA
ATAGACGGGAAGTGGCGGATTGGATGTTGGAAATCTGCGAGGACAGAGGA
GTATCCCCTGAAGTCTTTGTACTTGCTATGAACTACTTAGATCGGTTCCT
TAGTGTATGCACAATATCCAAGAGTCAGCTTCAGCTTCTCGGAGCTGTTT
GTTTACTCGTGAGTTGGAAAGTCCGGGAACATCGTCCTCTTCCTGCCTCA
AAGCTGGTTGAATACTCTGATTTCAATCTTACACTGATAGATATAATGGT
TAGTATCAAAGAAACCCTTATTTTTATTTCATCTGACATACCCCCGTGGT
CAGAATGCAAAGGCTGTTTGGTTCTAGCCAGATTCTTGTTGTTTGAATTG
AACTGACAAGAAACAGACAGCGTCTTTGAACTGACTTTTACTCATCGAAC
TGAATATAGTTATTATACATGCCTTGTATTTTTACCTGAGACATACCCAT
ATATTTTTTAAGTGGTATTATTTATTTTTTCAGGAATGGGAAGTGCTTCT
ACTCTCTAAGTTGGACTGGGACATGTCAGCTGTAATTGCTTCGGATTTCC
TGGAACATATCGTTCAAAGACTCACAATTCTAGATGTTTCCAGCAATCTT
GTCCATATACGTCAACAAGCAGAAGCACGCATCCTCCTTTGCTCCTCTCA
CTATGAATTTTCTTCTATAAATCCGTCCTTAATAGCAATTGCATGCGTCT
TAGCGTCTCTTGAGCCTCACTTTGGTTTTAGAAAAGAAAATTTATTGGAG
TTTCTCAAAAGTATCAAGTCCCTAGATAACAAAGAGCTAATACACAACTT
GGTTTCTAGAATAGAGAATCTCATGAAGAATTATCCTCTCCTCTCTTCTG
ATAAATCTTCTGCATCCACATCAAGGAATTCTGAAGACCTTACTACTCCA
ACTAAACTGCATGATGTGGTTGCTAAAAAATATGCGAGGCACTAAGTTGC
CATGTCAGATCTTAACTGTTGTTCTACTTTTATTCATTCAGTCTTTTATT
TCTATTTTTCTGTTGTCATTTTATAGTTGTTTAAAGAAAAAATGTATCTT
AGAAGAATCTTAATACACTATATATACGTAACAATAAAGAATCCATTGTG
ATATCAATCCTTTCA
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