EMLSAT00000003480, EMLSAT00000003480-699327 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003480
Unique NameEMLSAT00000003480-699327
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s18supercontigLSalAtl2s18:601853..603120 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003480 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003480EMLSAG00000003480-686246Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015119EMLSAE00000015119-724047Lepeophtheirus salmonisexon
EMLSAE00000015120EMLSAE00000015120-724048Lepeophtheirus salmonisexon
EMLSAE00000015121EMLSAE00000015121-724049Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778837auto778837Lepeophtheirus salmonispolypeptide
EMLSAP00000003480EMLSAP00000003480Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003480

>EMLSAP00000003480 ID=EMLSAP00000003480|Name=EMLSAP00000003480|organism=Lepeophtheirus salmonis|type=polypeptide|length=373bp
MGTYNKEELTPDLSDLRCSEVIDEKGLSTPSSLPIPVPGRPGGGEQDPEA
YPVKALNDPVLYKDDRILQNLLRLEENYLPSTPDYFKYVQKDISPPMRKI
VGDWMXQLCQELSAAPEVFCLAMNYMDRFLSRCRVDKSKLQLVGAVCLLV
ASKFRETRPILGERLIFYTDFSITSEEIKDWELLLLQELRWELSSVTPLE
FLDQIIHRIGIHSSIDLVRLKQRAETIIVLSILEYKFSYLTPSLMASAGL
FAALKVISNDPSVLCEDVASYREIGLRLQTLTHIVASDLDLCMTQMEKIL
PDYLKANTTPIECALADSTSSPKSLVSESSSNPSSLESGGIYDLDHNHHH
PSSSTSDLNPTQTSDANLSILVN
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mRNA from alignment at LSalAtl2s18:601853..603120-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003480-699327 ID=EMLSAT00000003480-699327|Name=EMLSAT00000003480|organism=Lepeophtheirus salmonis|type=mRNA|length=1268bp|location=Sequence derived from alignment at LSalAtl2s18:601853..603120- (Lepeophtheirus salmonis)
ATGGGAACTTATAACAAGGAAGAGCTTACTCCGGATCTAAGTGATCTTCG
GTGTTCTGAAGTCATCGACGAAAAAGGACTGAGTACTCCCTCCTCCCTAC
CGATACCAGTCCCTGGCCGACCTGGGGGAGGAGAACAAGACCCGGAGGCA
TATCCTGTCAAAGCTCTCAATGATCCTGTATTGTACAAAGATGATCGGAT
CCTCCAAAACCTACTCCGTTTGGAGGAAAACTATCTTCCGTCCACTCCTG
ATTATTTCAAATATGTGCAAAAGGACATCTCACCGCCCATGAGAAAAATT
GTTGGAGATTGGATGSTTCAGCTTTGTCAGGAGCTGTCCGCTGCTCCTGA
AGTTTTCTGCTTAGCTATGAATTACATGGATCGCTTTCTATCCCGCTGTC
GTGTCGACAAGTCCAAGCTCCAACTTGTTGGAGCTGTTTGTCTACTCGTT
GCCTCCAAGTTCCGTGAGACTCGACCCATTTTGGGTGAGAGACTCATATT
TTACACGGACTTTAGCATCACATCCGAGGAAATAAAGGTAAGGGCAACAC
TTAGTACCATGTAGTCACATGGTTTTATTTCTTTTGATTTTTCCTTCAAG
GATTGGGAGCTACTCCTTCTACAGGAACTACGATGGGAGCTTTCCTCTGT
TACCCCATTAGAATTCCTTGATCAAATAATTCACCGTATTGGCATTCATT
CTTCAATTGATCTTGTGCGGCTCAAGCAACGAGCTGAAACGATCATCGTT
CTTTCAATATTAGAGTACAAATTTTCTTACCTAACTCCGAGTTTAATGGC
CTCCGCCGGACTTTTCGCAGCTCTTAAAGTGATATCTAATGACCCCAGTG
TCCTTTGTGAAGATGTAGCCTCGTATAGAGAAATTGGACTTCGTCTACAG
ACGCTAACGCATATTGTCGCTGTATGTTTTTACCAAATTTAGTTTTTTAT
TTTAAGAAACAACAGCTCAGAAAACTAACATTTTCTTTTCCTTATTATTT
GCAGAGTGATTTGGACCTTTGCATGACTCAGATGGAAAAAATTCTTCCCG
ACTATTTAAAAGCCAACACCACTCCGATTGAATGCGCTTTAGCAGACTCT
ACCTCATCACCCAAGTCCTTAGTCTCAGAAAGCTCCTCCAACCCTTCATC
TCTGGAGAGTGGTGGAATCTACGATCTTGACCATAATCATCACCATCCAT
CCTCTTCAACCTCTGATCTCAATCCAACACAAACTTCTGATGCTAATTTA
AGCATCCTTGTAAATTAA
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