EMLSAT00000003489, EMLSAT00000003489-699336 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003489
Unique NameEMLSAT00000003489-699336
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1905supercontigLSalAtl2s1905:36648..38258 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003489 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003489EMLSAG00000003489-686255Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015164EMLSAE00000015164-724092Lepeophtheirus salmonisexon
EMLSAE00000015165EMLSAE00000015165-724093Lepeophtheirus salmonisexon
EMLSAE00000015166EMLSAE00000015166-724094Lepeophtheirus salmonisexon
EMLSAE00000015167EMLSAE00000015167-724095Lepeophtheirus salmonisexon
EMLSAE00000015168EMLSAE00000015168-724096Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770140auto770140Lepeophtheirus salmonispolypeptide
EMLSAP00000003489EMLSAP00000003489Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003489

>EMLSAP00000003489 ID=EMLSAP00000003489|Name=EMLSAP00000003489|organism=Lepeophtheirus salmonis|type=polypeptide|length=296bp
MWSLLVLVIVLCFSSSVYSFSTVLYESCGSSPSKKQKGCNPRLNRITNGV
AAEEGEIPWQVSIITRYLGNDEENECGGSIISNNFVLTAAHCFNPIIIQS
VRHEYDRERISVYAGGYKRIRSGTEYRIKSIIKHPDYAINKIGLINDLAL
LKMSKDFEFSSTIQPICLPFLKPSIPNIGSTIVGSGWGKRHSQDIGXRLS
LFRGDMKVYSSISRNCKPDILQYAPENTIMCVYLPSSCXCSGDSGGPLTM
EVNGICTLVGVTSQGYQCGEVGYGSMHTNVSTFLDWILENIHERCS
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mRNA from alignment at LSalAtl2s1905:36648..38258+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003489-699336 ID=EMLSAT00000003489-699336|Name=EMLSAT00000003489|organism=Lepeophtheirus salmonis|type=mRNA|length=1611bp|location=Sequence derived from alignment at LSalAtl2s1905:36648..38258+ (Lepeophtheirus salmonis)
TTTCAGAAAGGATATAGATATTGCACAGTTGATTTTTAGAAGTCAACGTT AACAATACATTTCCATAGACTACAGAATGTGGAGCTTACTTGTACTTGTT ATAGTCCTTTGTTTTTCTAGTTCTGTATATTCATTTTCTACAGGTATAAT TATTTTGTTTTTTTATCTATAGAAAATATTACTTTTATTGATATATTAAT AGTGTTGTATGAATCATGTGGTTCATCCCCTTCAAAGAAGCAGAAGGGAT GTAATCCGCGTTTGAACAGGATTACCAATGGAGTAGCGGCAGAAGAAGGG GAAATACCTTGGCAAGTATCCATTATCACTAGATATTTGGGTAATGATGA AGAGAATGAGTGTGGAGGATCGATTATCAGTAACAACTTTGTGTTAACTG CTGCTCATTGCTTTAATCCAATTATTATTCAAAGTGTTCGACATGAATAT GATAGGGAAAGGATTTCAGTACGTATATATAGTGACATTTTTTGCTGTGC AACAGTGTTATTAAAAACATATTATATTTATATAAGTATACTAGCGGTCG AATATTATATTCTTAATTTTTTGTTCATTACTGAATAAGTCGTAGTGTTC ATATATAAAACCAAATTAACTTAAGTGTGCAAAAAAAAATTAGAGGGATC GCTCTTACGATTTTTAGAGCTGTACAAAATCTTTTGTATTTGCTTTATTT TTTTCAAATTTTTACCAAGTATGACTTTTGCAGGTTTACGCAGGTGGATA TAAAAGGATTCGGTCAGGAACAGAATATAGGATAAAGAGCATTATAAAAC ATCCAGACTATGCAATTAACAAGATTGGCCTGATCAACGATCTGGCACTC TTAAAAATGAGCAAGGACTTTGAGTTTTCATCAACCATTCAACCCATTTG TTTACCGTTTCTTAAACCTTCAATTCCCAATATAGGATCTACTATTGTAG GTAAGTATGAATTATAAATTAATATTTATCTAAATATGATTAAAAAATAA ACCATCTTAAATAGGAAGTGGATGGGGTAAGAGGCATTCTCAGGATATTG GATGKCGACTTAGTCTTTTCAGAGGCGACATGAAAGTCTACAGTTCTATA AGTCGGAATTGCAAACCAGATATATTACAATATGCACCAGAAAATACAAT TATGTGCGTTTATTTACCATCATCTTGCRCTTGCTCAGGGGATTCGGGGG GTCCACTAACAATGGAAGTGAATGGAATATGTACATTAGTAGGAGTTACT TCTCAGGGGTATCAATGCGGAGAGGTGGGCTATGGTTCCATGCATACAAA TGTTTCGACCTTTTTGGATTGGATCCTTGAAAATATACATGTAGGTTACT TCCACTCAATCTAGATAGAACATTAAAATATCTTTGATTTTCATTATAGG AACGTTGCTCTTAACCGTTAAACAAATTAAACTAGTTGCCTATGTCATGT GAGGGATTTGTTATATATTTTCTTTTACTTTTACGGATTATATGACTCTG CTTTCTAAATAAATCTTTGTAAAAGTAGCACCTATGTCGTGATGAATCAT TAAAGTTGTAAATTATAAACAGTATATACAGATATAAACATCCTAATTTT GACAATTTTGT
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