EMLSAT00000003508, EMLSAT00000003508-699355 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003508
Unique NameEMLSAT00000003508-699355
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s191supercontigLSalAtl2s191:296049..297035 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003508 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003508EMLSAG00000003508-686274Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015255EMLSAE00000015255-724183Lepeophtheirus salmonisexon
EMLSAE00000015256EMLSAE00000015256-724184Lepeophtheirus salmonisexon
EMLSAE00000015257EMLSAE00000015257-724185Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776012auto776012Lepeophtheirus salmonispolypeptide
EMLSAP00000003508EMLSAP00000003508Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003508

>EMLSAP00000003508 ID=EMLSAP00000003508|Name=EMLSAP00000003508|organism=Lepeophtheirus salmonis|type=polypeptide|length=280bp
MNDERASLIRLLNSNSSAPQLEATPLRLDANYAIYYNNWTRLLILGIVPF
VALVFFNTKIYNDIQVRRRHRCPKFVKRNSDTIENPPKGICTSSPPNANR
RKHEDNLATVFLGIVGVFLICHIPRIVLSLHETVVIHDILQCDQMNAGNY
MPYWVYILTYISHLLLVVNSSVNSIIYCGLSSRFRKQLLRFLGHYSEKFG
FKFQKSSNINLQISHLPRSRPNFNPIPNCTNNNSHHHLLQQKSFDNSNNS
TMAKPTQLLLSKKVDNSPDETLYVSQISQV
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mRNA from alignment at LSalAtl2s191:296049..297035-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003508-699355 ID=EMLSAT00000003508-699355|Name=EMLSAT00000003508|organism=Lepeophtheirus salmonis|type=mRNA|length=987bp|location=Sequence derived from alignment at LSalAtl2s191:296049..297035- (Lepeophtheirus salmonis)
ATGAATGATGAAAGAGCAAGTTTAATACGTCTTTTGAAGTATGTTGTGCC
TGTAGCCCTCTTTTCAGTCATTTTCAATATTCCAAAGTTTCTGGNAACTA
CACATCACCTATAGCTCTAATTCAAGTGCACCCCAACTGGAAGCCACTCC
GCTTCGTTTGGACGCCAACTATGCCATATATTACAACAACTGGACTCGTC
TTCTCATTTTAGGGATCGTTCCATTTGTGGCACTCGTCTTTTTCAATACA
AAGATTTATAATGATATTCAGGTAAGCACTTTGTTATAAACTATACTCCT
GCGTCAAGAATTAAATTACTCATGAAACATTCATTTCAGGTTCGTAGAAG
ACATCGATGCCCAAAATTTGTCAAACGCAATTCGGATACAATTGAAAATC
CCCCCAAAGGCATTTGTACTTCTTCACCTCCAAATGCAAATCGACGGAAA
CATGAGGATAATTTGGCTACTGTATTTCTGGGAATTGTAGGCGTCTTTTT
AATTTGCCACATCCCTCGAATTGTGTTGAGTCTCCATGAGACTGTTGTGA
TTCACGACATTCTTCAATGTGATCAGATGAATGCAGGGAATTATATGCCA
TATTGGGTATATATACTCACCTATATTTCGCACTTACTCCTTGTGGTAAA
CTCATCTGTCAATTCAATAATTTATTGTGGACTTTCATCGCGATTTAGAA
AACAGCTTTTGAGATTTTTAGGCCACTACAGTGAAAAATTTGGGTTTAAG
TTTCAAAAAAGTTCAAATATTAATCTGCAAATAAGTCATCTTCCAAGATC
AAGACCAAACTTTAATCCCATCCCCAATTGCACCAATAACAATAGTCACC
ACCACTTGCTTCAGCAAAAGTCTTTTGATAATTCGAACAATTCTACAATG
GCCAAACCGACCCAATTATTGTTGAGTAAGAAAGTTGATAACTCTCCTGA
TGAAACTCTCTATGTCTCGCAAATTTCTCAAGTTTAA
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