EMLSAT00000003510, EMLSAT00000003510-699357 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003510
Unique NameEMLSAT00000003510-699357
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s191supercontigLSalAtl2s191:404984..406519 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003510 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003510EMLSAG00000003510-686276Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015262EMLSAE00000015262-724190Lepeophtheirus salmonisexon
EMLSAE00000015263EMLSAE00000015263-724191Lepeophtheirus salmonisexon
EMLSAE00000015264EMLSAE00000015264-724192Lepeophtheirus salmonisexon
EMLSAE00000015265EMLSAE00000015265-724193Lepeophtheirus salmonisexon
EMLSAE00000015266EMLSAE00000015266-724194Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777340auto777340Lepeophtheirus salmonispolypeptide
EMLSAP00000003510EMLSAP00000003510Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003510

>EMLSAP00000003510 ID=EMLSAP00000003510|Name=EMLSAP00000003510|organism=Lepeophtheirus salmonis|type=polypeptide|length=215bp
MKTNICIAIERKNCTNLISVALTXANPTQTHINEGRIIGGEEVEPNSIPF
QVAFQKTSGFLLCGASIINKDTAITAAHCCSDLSPEDVMVVAGEHDLSEK
SGDEQTDEEFTGEAIVSGWGVRSFGSSTSPVLRATNITLISFDECKDKYG
RQFDETMICAGSLGKDSCQGDSGGPLFQNGKLVGIVSWGVFCGHPSYPGV
YGKVSKFHDWILAHN
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mRNA from alignment at LSalAtl2s191:404984..406519-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003510-699357 ID=EMLSAT00000003510-699357|Name=EMLSAT00000003510|organism=Lepeophtheirus salmonis|type=mRNA|length=1536bp|location=Sequence derived from alignment at LSalAtl2s191:404984..406519- (Lepeophtheirus salmonis)
ATGAAAACAAATATTTGTATAGCTATAGAAAGGAAAAATTGCACTGTTAT
TTATTTTTATGAGAGAACAAAAAAAAATTAAATTAATTTTCCATTTTTTT
TTCTAATTAAAAGGGTTTTTACACATAATGCAGATAATGGTCTGGATTAA
CCACACAAAAATGAAATCTTATCTTTTTATGAATATGTACTCAATATTTA
TTTGATATTATCTTTAAATTCTAATACTTAAAGCTATATAAGGGGTTGAT
AAATGGGAAATTACTTTAGTATATCAAACCGAATTAGACTATATCATTGC
AGTATTTCAACAAACCTTTTGATCATGTCTAGAATCTTATCAGTGTTGCA
CTTACTMCCGCCAATCCGACCCAAACACATATTAATGAAGGGCGAATTAT
AGGGGGCGAAGAGGTTGAGCCTAATTCTATTCCCTTTCAAGTTGCCTTCC
AGAAAACTTCTGGATTCTTATTATGTGGGGCATCCATTATCAACAAGGTA
ACATAACAATGCTTTATTCTTCATTTTGACAAAGTATAATTACATAATAG
GATACTGCCATCACTGCTGCCCATTGCTGTAGCGATCTTAGCCCAGAGGA
TGTCATGGTTGTTGCTGGAGAACATGATCTATCTGAGAAAAGTGGAGATG
AACAAACGGTTGGAGTGCAAAAAATTATAATGTATGAACTGTATGGAACT
AAAAGGAATAGTTACGATATTTGTCTTTTGAAACTAGAATCTCCTTTAAA
GCTAAATGAGTAAGATGTTCTTTATTTTTTGCAGAGGTAGAGTCTTGGAC
TTGAAGACTTTTGGACTCGACTTGATTACACAATCAAAGACTTAAGAGTT
GACTCCGACTCGAAAGCATGGACTCGCGACTCGATTTGGACACAAAAGTG
AACTAATTTTTTTACTTGATATAAAGTTTTCTTTATAGTATATTTTTTTA
TCTGAGGACTTGAACTAGAGTCGATCAAAAATATTTGAGGACTTGGACTT
CCAAGTTAAGACTTGGTACTTGACTTGGACTTAAAGTTTAAGGACTTATT
CTAAACATCTACTGCTCAGTTTTTTGAACTAATTACATATTATATTTCAT
GATCTTAGTAAGGTCAAGACAATTACTCTCCCTGAAAAGGATGAAGAATT
TACTGGTGAAGCTATTGTGTCTGGATGGGGAGTTCGTTCCTTTGGAAGTT
CAACATCTCCAGTTCTAAGAGCCACTAATATTACATTAATTTCATTCGAT
GGTAATTATCTACTTAAAAATATATATTTTTTGCAAAATGACCATAAAAT
TCTTAACCATTTTTTAAGAATGTAAAGACAAGTATGGTCGCCAATTTGAT
GAAACCATGATCTGTGCCGGATCCCTTGGAAAAGATTCTTGTCAAGGTGA
TTCTGGTGGTCCTTTATTTCAAAATGGAAAACTTGTTGGCATAGTATCAT
GGGGCGTTTTTTGTGGACATCCAAGTTATCCAGGAGTTTATGGAAAAGTT
TCAAAATTCCATGATTGGATTCTTGCACACAATTAA
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