EMLSAT00000003514, EMLSAT00000003514-699361 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003514
Unique NameEMLSAT00000003514-699361
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s191supercontigLSalAtl2s191:53010..55109 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003514 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003514EMLSAG00000003514-686280Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015293EMLSAE00000015293-724221Lepeophtheirus salmonisexon
EMLSAE00000015294EMLSAE00000015294-724222Lepeophtheirus salmonisexon
EMLSAE00000015295EMLSAE00000015295-724223Lepeophtheirus salmonisexon
EMLSAE00000015296EMLSAE00000015296-724224Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770752auto770752Lepeophtheirus salmonispolypeptide
EMLSAP00000003514EMLSAP00000003514Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003514

>EMLSAP00000003514 ID=EMLSAP00000003514|Name=EMLSAP00000003514|organism=Lepeophtheirus salmonis|type=polypeptide|length=532bp
MSLALYIAPDKFFIRDESSLSPSTPALVIDRLNCDIECVIDADIPVISNR
KSIHGLLGIVPLLSGPHLVVITHKSKVGEIVHNHTIWKVEATEIISFSRA
NLHLTKEESEKNKVMMDMIIQVLSTPAFYFCHTLDMTRNIQNRGNTDTKQ
SLIQSADFEYVWNRKLLEPFFDRPELHRFCLPIIHGAIFIQRCSVNGKFF
RWALISRRSSDRVGTRFFVRGVNHFGKVANFVETEQIVEHDGAISSFVQS
RGSIPMFWSQLPTLEYMPKPSIMLGEDHQTGFDVHFGEQINKYGDVVAXN
LINTHGYEGKLEKSYRQLCSNSVKAPRISYEGFDFHAEGWSRISKLIDRL
SSYQNKFNFFYYDSRQRTPNLVQSGIFRTNCMDCLDRTNVVQSMLAFENL
KSVFSRMGISNSGLELNTDFIKVFKNVWADHADDSLDIFIGKIGTGLNAR
SFDSYPIFFHQSEFKAVHIIPLSLLVIIASFFLILLFSSEINSHTFLFLF
FLACLIAILLMMLFRFGPQFVDWPKFNQFHLQ
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mRNA from alignment at LSalAtl2s191:53010..55109+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003514-699361 ID=EMLSAT00000003514-699361|Name=EMLSAT00000003514|organism=Lepeophtheirus salmonis|type=mRNA|length=2100bp|location=Sequence derived from alignment at LSalAtl2s191:53010..55109+ (Lepeophtheirus salmonis)
ATGTCTTTGGCTCTTTATATAGCTCCAGACAAATTTTTTATCCGTGATGA GTCCTCGTTGAGTCCGTCCACACCCGCTTTAGTCATTGATCGACTCAATT GTGACATTGAGTGCGTCATTGATGCGGATATTCCCGTTATTTCTAATCGA AAGTCCATCCACGGTCTTCTGGGAATCGTTCCCCTTCTCTCAGGCCCACA TCTTGTTGTGATCACCCATAAATCTAAGGTATGTGAACCCGAATAGGAAT GGTATGATAATGATAATTCTTTTTAGGTTGGGGAAATCGTTCATAATCAC ACAATATGGAAAGTGGAAGCAACGGAAATCATTTCATTTTCAAGGGCAAA TCTTCACCTAACCAAAGAAGAGTCAGAAAAGAATAAAGTTATGATGGACA TGATCATTCAAGTCCTCTCTACGCCAGCCTTTTACTTTTGTCATACTCTG GATATGACTCGAAATATTCAAAATCGTGGAAATACTGATACAAAACAATC CCTTATCCAAAGTGCAGATTTTGAATACGTCTGGAATCGAAAACTCTTGG AACCCTTTTTTGATCGTCCTGAATTACATCGATTCTGTCTTCCAATTATT CATGGAGCCATTTTCATTCAGCGTTGTTCTGTTAACGGAAAGTTTTTTCG GTGGGCTTTAATTTCAAGGCGATCTTCAGACCGGGTTGGGACTCGGTTTT TCGTAAGAGGAGTCAATCATTTTGGAAAGGTGGCCAATTTTGTTGAAACA GAGCAAATTGTTGAGCATGATGGAGCTATTTCATCATTTGTTCAGTCTCG TGGATCCATTCCAATGTTTTGGTCTCAATTACCTACTCTTGAATATATGC CAAAACCAAGTATAATGCTTGGAGAAGATCATCAAACAGGGTTTGATGTT CATTTCGGTGAGCAAATCAACAAATACGGAGATGTCGTGGCTGMAAATTT AATTAATACCCATGGATATGAAGGAAAATTGGAGAAAAGTTATCGACAAC TTTGTTCTAATTCTGTCAAAGCACCTAGAATATCATATGAAGGGTTTGAT TTTCATGCAGAGGGTTGGAGTCGAATCTCCAAGCTTATCGACCGTTTGTC GAGCTATCAAAATAAATTTAATTTCTTTTATTATGACAGTCGTCAAAGGA CTCCCAACTTAGTACAATCTGGCATTTTTAGAACGAATTGTATGGACTGT CTGGATCGAACCAATGTAGTCCAATCCATGCTTGCTTTTGAGAATTTGAA AAGTGTCTTTAGTCGTATGGGAATATCCAACTCTGGGTTAGAGCTCAATA CGGATTTTATCAAAGTCTTCAAAAATGTTTGGGCGGATCATGCGGACGTC ATAGCTGTTCAATATGCTGGAKCTAGAGCCATGAAGACAGATTTTACTCG CACGGGAAAGAGAACTTACGCYGGAATTTTGGACGATGGATKCAATGCAT TNNTCTAGATATGTGAAAAATAACTTTTTTGACGGTTTTCGACAGGATTC ACTGGACATTTTTATAGGAAAAATTGGAACGGGTGGGTTTCCTCTTTCAG TTGTTTTTGTTTATTTTCAAAGTTTTTAACTATTACTGCTTTTTTCAGGT CTTAACGCACGAAGTTTTGATTCTTACCCCATCTTCTTTCATCAATCTGA ATTCAAAGCTGTTCATATCATACCACTGTCCCTCCTCGTCATCATTGCCT CTTTCTTCCTGATTTTACTGTTTTCATCGGAAATTAACTCTCACACATTT TTGTTTTTATTTTTTTTAGCTTGTCTCATTGCTATACTTCTCATGATGTT GTTTCGGTTTGGGCCTCAATTTGTGGACTGGCCTAAATTCAATCAGTTTC ATTTACAGTGAATTTATTTAAATTCATGTAAAAAAATGATTGTAATTCAT ATTAATCAGACATTTCTATACACCTACAAATCTACCATATGTCTTATACT TACCATAGAAAAATTCAATCTATTTCTCTGTTATTTAAAAAAATATTACT TAATCATTGATATTATAATTTGATGTTTAAAAATGTCAAATTTCTTCTCT TATAAAGAATAAATTTTGTTTTTAACCTCAAGAAATGGACCACTTTATGC
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