EMLSAT00000003516, EMLSAT00000003516-699363 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003516
Unique NameEMLSAT00000003516-699363
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s191supercontigLSalAtl2s191:316055..316960 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003516 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003516EMLSAG00000003516-686282Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015300EMLSAE00000015300-724228Lepeophtheirus salmonisexon
EMLSAE00000015301EMLSAE00000015301-724229Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776274auto776274Lepeophtheirus salmonispolypeptide
EMLSAP00000003516EMLSAP00000003516Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003516

>EMLSAP00000003516 ID=EMLSAP00000003516|Name=EMLSAP00000003516|organism=Lepeophtheirus salmonis|type=polypeptide|length=180bp
MNSMMNQSLGDFDPSICEGYDPVNDSVMQMLDFWIEGIFIVFIAVLGIIF
NVGSTVILSLKEMRNSFNLLLIALSTFDTLYLVGSLSESLGKIIGFHSEI
QIILIPLLFYPGRMIMMTTSVFMTIAIAMERYVAVHYPLDYNQNSLDNHP
SPSFERFEKEKSTTFPANPNGLKSLPEPFT
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mRNA from alignment at LSalAtl2s191:316055..316960-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003516-699363 ID=EMLSAT00000003516-699363|Name=EMLSAT00000003516|organism=Lepeophtheirus salmonis|type=mRNA|length=906bp|location=Sequence derived from alignment at LSalAtl2s191:316055..316960- (Lepeophtheirus salmonis)
ATGAATAGTATGATGAACCAATCCCTTGGAGATTTTGATCCTTCAATTTG
TGAGGGCTATGATCCAGTTAATGACTCAGTGATGCAAATGTTGGATTTTT
GGATTGAAGGGATTTTCATAGTGTTCATTGCGGTTTTAGGCATTATCTTC
AACGTAGGATCAACAGTTATATTAAGTCTTAAAGAAATGAGAAACTCTTT
TAACCTTTTGCTAATTGCACTATCAACATTTGATACACTTTACTTGGTAG
GAAGTCTCTCTGAAAGTCTCGGCAAAATTATTGGGTTTCACTCGGAAATA
CAAATCATTCTGATTCCTCTCCTTTTCTATCCTGGAAGAATGATTATGAT
GACTACATCTGTATTTATGACAATTGCTATAGCGATGGAGCGATATGTTG
CAGTTCATTATCCCTTAGACTATAATCAGGTAAGGAAGTTTTTTTATCCA
GGTATCGATGTATATATTTTTAAATATACCTATATTGCATACAAATGTAA
CTGTATTTTAATATAAAAAGGAACAAAAACAAGTAAAATAGTGGCAACAT
TAAATGAAACGTTCGCACTTCCTCTTTGGAATGATTTTTTTGCTCTGAAC
TTTTTATGCCAGGAATTTACAGGCAAATTAAATAGCTTTCTAAATTGTAA
TGCCAGTTAAAAAGTAAAGTTCTTCTTTAAAATAGTTGATTGACAGTACG
TAAAAAAGTAGACGTCTCTTCAGTATAACTAAGGGTTTTATTTTTCCATT
CATTTTTCAAACCATAAAGAATTTTTCATTCTTCCTCAAAAGAATTCATT
AGATAACCACCCTTCTCCCTCCTTTGAAAGGTTCGAAAAAGAAAAGTCCA
CGACTTTTCCTGCAAATCCAAACGGCCTAAAATCTTTGCCCGAGCCTTTT
ACATAG
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