EMLSAT00000003552, EMLSAT00000003552-699399 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003552
Unique NameEMLSAT00000003552-699399
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s194supercontigLSalAtl2s194:292445..293302 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003552 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003552EMLSAG00000003552-686318Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015471EMLSAE00000015471-724399Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775967auto775967Lepeophtheirus salmonispolypeptide
EMLSAP00000003552EMLSAP00000003552Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003552

>EMLSAP00000003552 ID=EMLSAP00000003552|Name=EMLSAP00000003552|organism=Lepeophtheirus salmonis|type=polypeptide|length=285bp
MSFLNYVYCTYFATPLNVKKMGQWALVTGATDGIGRAYADALAKRGLDII
LVSRSPFKLQNAAADIENKYKVKTKIIDVDFTTDSLELASRLKRELKELE
VGVLINNVGMSYEYPEEFLSMSEGESATDTFIKCNIMSVDIMTRLLLPSM
VDRKKGVIVNIASLSGQYTSPFLSLYSATKAYVDFFTRGLEAEYRSKGIT
IQCVLPGFVASKMSKIRRPNVFAPSPEMFVKSCMKKLGVQSRTNGYWLHE
VMSCALDLLPEWMVQKIFFGVLNATRLKALKKKRR
back to top

mRNA from alignment at LSalAtl2s194:292445..293302-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003552-699399 ID=EMLSAT00000003552-699399|Name=EMLSAT00000003552|organism=Lepeophtheirus salmonis|type=mRNA|length=858bp|location=Sequence derived from alignment at LSalAtl2s194:292445..293302- (Lepeophtheirus salmonis)
ATGTCCTTCCTAAACTATGTTTACTGCACGTATTTTGCTACCCCTCTAAA
TGTGAAGAAAATGGGTCAATGGGCATTAGTAACTGGAGCTACAGATGGGA
TTGGCCGTGCATATGCAGATGCCCTGGCAAAAAGAGGACTCGATATAATC
CTTGTAAGTCGTTCCCCATTCAAGCTTCAAAACGCAGCCGCAGACATAGA
AAATAAATACAAAGTCAAGACAAAGATCATTGATGTTGATTTCACCACGG
ATTCATTGGAACTGGCGTCTCGTCTGAAAAGGGAATTAAAAGAGCTCGAG
GTGGGGGTTTTGATCAACAATGTTGGTATGAGCTATGAATACCCTGAGGA
ATTCTTAAGCATGTCTGAAGGAGAGTCTGCAACGGATACTTTTATTAAGT
GCAATATCATGTCTGTTGACATCATGACTCGTCTACTCCTTCCTTCAATG
GTGGATCGTAAGAAGGGGGTTATAGTTAATATTGCAAGTTTGTCTGGTCA
ATATACGAGTCCATTCTTATCCTTGTACTCTGCAACTAAAGCATATGTTG
ATTTCTTTACCAGAGGATTGGAAGCTGAATATAGGTCTAAGGGAATAACT
ATCCAATGTGTGCTTCCTGGATTTGTTGCGAGTAAAATGAGTAAAATTCG
TCGTCCCAATGTCTTCGCTCCCTCTCCGGAAATGTTTGTTAAATCTTGCA
TGAAAAAATTAGGTGTACAGTCAAGAACAAACGGATATTGGCTTCATGAA
GTCATGTCCTGCGCTTTAGATCTTCTTCCTGAATGGATGGTTCAAAAAAT
ATTTTTTGGAGTTTTGAACGCCACTAGGCTAAAGGCTCTTAAAAAGAAAC
GTCGTTAA
back to top
Add to Basket