EMLSAT00000003562, EMLSAT00000003562-699409 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003562
Unique NameEMLSAT00000003562-699409
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1957supercontigLSalAtl2s1957:23934..24835 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003562 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003562EMLSAG00000003562-686328Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015508EMLSAE00000015508-724436Lepeophtheirus salmonisexon
EMLSAE00000015509EMLSAE00000015509-724437Lepeophtheirus salmonisexon
EMLSAE00000015510EMLSAE00000015510-724438Lepeophtheirus salmonisexon
EMLSAE00000015511EMLSAE00000015511-724439Lepeophtheirus salmonisexon
EMLSAE00000015512EMLSAE00000015512-724440Lepeophtheirus salmonisexon
EMLSAE00000015513EMLSAE00000015513-724441Lepeophtheirus salmonisexon
EMLSAE00000015514EMLSAE00000015514-724442Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769618auto769618Lepeophtheirus salmonispolypeptide
EMLSAP00000003562EMLSAP00000003562Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003562

>EMLSAP00000003562 ID=EMLSAP00000003562|Name=EMLSAP00000003562|organism=Lepeophtheirus salmonis|type=polypeptide|length=161bp
MSSQLKNINDAFSDFTVTRSLLLTTIEEETIAPNVTERCLTVDDRECQFP
IIIGNTSISMCISIGLGDGVYFCPVHTLPDGMATPDSLSVLGICKPDCPR
LIPMPIAITEDMNSTPDINKTPQFGTPPPNTPFPIQTATTTMNTITTTCK
FIQSKNLKYLN
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mRNA from alignment at LSalAtl2s1957:23934..24835-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003562-699409 ID=EMLSAT00000003562-699409|Name=EMLSAT00000003562|organism=Lepeophtheirus salmonis|type=mRNA|length=902bp|location=Sequence derived from alignment at LSalAtl2s1957:23934..24835- (Lepeophtheirus salmonis)
ATGTCTTCTCAATTAAAGAATATAAATGATGCTTTTTCTGATTTTACAGT
TACTCGTTCCCTACTTCTAACAACAATTGAGGAAGAAACGATTGCACCAA
ATGGTAAAATCTAATTATCTTTTCTCATCATCTTTAATTAATCAACAATA
CAATTTATCACTTGAAATTATTAACTATTTTATTCACTTATAGTCACTGA
ACGTTGTTTGACGGTTGACGATAGGGAATGTCAATTCCCGATTATTATCG
GGAATACGTCCATTAGTATGTGTATTAGCATAGGCTTAGGAGATGGTGTA
TATTTCTGCCCCGTTCATACACTACCTGATGGAATGGCTACTCCAGATAG
TTTATCAGTTTTAGGGATTTGCAAACCAGATTGTCCAAGTATATAATCAC
ATAAATTAAACTTACTATATAAAAAACAATATTTGCGTTCTGTTTATACT
TTCATTTTGTTTTGTCAGGACTAATTCCTATGCCCATAGCAATAACCGGT
GAGTTTTATTCGATATTAAATGCGTAAATCAATTATGTTTTTTCTTTTTT
CTTGGGCTACAGAGGATATGAATTCAACTCCAGATATTAATAAAAGTAAG
TACATTTGAGATATAACTTGTATTTCATTATTTAATAAAATTATAACTTT
TATTTTACAATATAGCACCACAATTTGGAACCCCGCCTCCGAATAGTAAG
TATATGTTATAGTTTCCACCCTATTGAAATACCTATATTTTTTTCAGCAC
CATTTCCGATCCAAACTGCAACGAGTAAGTTTTAATCAAATTGTATGACT
CACTGATTTAAATGTATATTTTTCATAAATCTAGCAACTATGAACACAAT
TACAACTACTTGTAAGTTTATTCAAAGCAAAAATCTCAAATATTTGAACT
AA
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