EMLSAT00000003570, EMLSAT00000003570-699417 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003570
Unique NameEMLSAT00000003570-699417
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1961supercontigLSalAtl2s1961:13609..15847 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003570 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003570EMLSAG00000003570-686336Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015555EMLSAE00000015555-724483Lepeophtheirus salmonisexon
EMLSAE00000015556EMLSAE00000015556-724484Lepeophtheirus salmonisexon
EMLSAE00000015557EMLSAE00000015557-724485Lepeophtheirus salmonisexon
EMLSAE00000015558EMLSAE00000015558-724486Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769111auto769111Lepeophtheirus salmonispolypeptide
EMLSAP00000003570EMLSAP00000003570Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003570

>EMLSAP00000003570 ID=EMLSAP00000003570|Name=EMLSAP00000003570|organism=Lepeophtheirus salmonis|type=polypeptide|length=663bp
MMNSGKLKVQVSXVIREEKEPCHRAGVNSLQYDASMKRLYTAGRDSVIRI
WNVSSLKTEGTYVSSMEHHTDWVNDIVLGCGGKNMISGSSDTTVKVWNAH
KGFCMSXLRTHKDYVKALAYAKDREQVASAGLDKSIYLWDINTLTALTAS
NNTVTTSSVSGNKDSIYSLAMNPAGTLLVSGSSEKTLRFWDPRTSAKLAK
LKGHTDNVKALILNREGTLCISGSSDGTFKLWSIGEQRCIATYYRHTEGV
WALQANESFTRVYSAGRDKNIILTDIRTSDNAFLVCRESAPVLKMILTTD
QEGLWVSTSESNVKYWNTSKIVRQCLPVPSSAPSDFPKYVPVLDKPDVVI
AGGASIKQYRVLNDKRHILTKDTCNNVALYDVLKAQKVQELKETEFDVYQ
REQMVYVPSWFSVDLKTGMLTIHLGQEENDCFSAWVSARETGLAPNDAAD
QKVNYGGLLLQALLEHWSRQNSIEDDSDIDGGQMHNGVNKGNGNEYFTVP
GHTPVIFSEVGGRTLYRLLAGDAGGETECTLLNENVPSWVIDIVVMKKLP
KFIKVTFYVLPHPCLNAKAIKKERLIANDFLQIRKVIEHVYEKVMMETVS
SVAGSPTGESNRDESSSSIVYAEDKVELFCNDIIIDPNMDLRTVKHFIWK
SSMDLVLNYRPIG
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mRNA from alignment at LSalAtl2s1961:13609..15847-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003570-699417 ID=EMLSAT00000003570-699417|Name=EMLSAT00000003570|organism=Lepeophtheirus salmonis|type=mRNA|length=2239bp|location=Sequence derived from alignment at LSalAtl2s1961:13609..15847- (Lepeophtheirus salmonis)
ATGATGAATTCCGGGAAGTTGAAGGTGCARGTGTCCTTSGTGATCCGCGA
GGAGAAGGAGCCGTGCCACCGAGCGGGTGTGAATTCTCTGCAATATGATG
CCTCCATGAAGCGTCTGTACACGGCGGGGAGAGACTCAGTGATTCGTATT
TGGAATGTGTCGAGCTTGAAGACTGAAGGGACGTATGTGTCCTCCATGGA
ACATCACACGGACTGGGTCAACGACATCGTTCTGGGCTGTGGGGGCAAGA
ACATGATCTCTGGCTCTTCGGATACGACTGTCAAGGTGTGGAACGCACAC
AAAGGCTTCTGCATGTCCMCGCTTCGAACCCATAAGGACTATGTCAAAGC
ACTGGCCTATGCCAAGGATCGGGAGCAAGTGGCCTCTGCAGGCCTGGATA
AATCCATTTACTTGTGGGATATCAATACACTCACGGCTCTCACGGCCTCC
AACAACACAGTCACGACATCCAGTGTGAGTGGGAATAAAGACTCCATCTA
CAGTTTGGCCATGAACCCTGCAGGGACTCTCCTTGTGAGTGGGTCTTCAG
AAAAAACTTTACGATTCTGGGATCCCAGAACCTCGGCCAAACTTGCCAAA
CTGAAGGGGCATACGGATAACGTTAAGGCACTCATTCTTAATAGAGAGGG
AACTCTGGTATGTGGATTCATATATGAATGCCCTCTTTGGGCCAAGGCTT
CACAAATTATTTGTTTTTTCTTTTCTTGTACAGTGTATTTCTGGTAGCTC
AGATGGTACATTCAAACTATGGTCTATCGGAGAGCAACGCTGTATTGCCA
CTTATTATCGTCATACCGAAGGGGTATGGGCGCTCCAGGCCAATGAATCT
TTTACGCGTGTTTATTCTGCTGGAAGAGATAAAAATATCATTCTCACAGA
TATTCGAACCTCAGACAATGCTTTTCTAGTCTGTAGGGAATCTGCTCCAG
TCTTAAAAATGATTCTCACTACAGATCAAGAAGGCCTCTGGGTATCAACG
TCAGAATCAAATGTCAAATATTGGAATACATCCAAAATTGTTCGACAATG
TTTACCAGTCCCCTCATCTGCGCCTTCAGACTTTCCTAAGTACGTCCCTG
TACTTGATAAACCTGATGTGGTTATTGCTGGTGGAGCTTCCATTAAACAA
TATCGAGTTTTAAATGATAAAAGGCACATATTAACCAAAGACACATGCAA
TAATGTGGCGTTGTATGATGTTTTAAAAGCACAGAAGGTCCAAGAACTTA
AAGAAACAGAGTTTGATGTCTATCAGCGTGAGCAGGTACTCCTACAGCGA
TTTAGATTGTTAAAATAAAACAAATTTAAATTTGTTTTTATTTTTATAAA
TTATACATATTTATATTTTTTTAGATGGTTTATGTGCCTAGTTGGTTCTC
AGTCGATTTAAAAACTGGAATGCTGACCATACATTTAGGACAAGAAGAAA
ATGATTGTTTTAGTGCTTGGGTATCTGCTCGGGAGACAGGACTTGCACCT
AATGATGCAGCGGATCAAAAAGTTAATTATGGAGGTCTTCTTCTTCAAGC
TTTATTAGAACATTGGTCGCGACAGAATTCAATTGAAGATGATTCTGATA
TTGACGGGGTAATGATCTATAGTTGTAAAAGAAGTATTTATGAAAATATA
TAAACGAAATACTTAATTTATTTTCTTTATCTCTTATCAGGGCCAAATGC
ACAACGGCGTTAACAAAGGAAATGGAAATGAATACTTTACTGTGCCTGGT
CACACTCCTGTCATTTTTTCAGAGGTTGGAGGACGCACTTTGTATCGATT
ACTAGCTGGAGATGCTGGGGGCGAAACGGAATGCACCCTTCTAAATGAAA
ATGTTCCTAGTTGGGTTATTGACATCGTTGTAATGAAAAAACTACCCAAA
TTTATCAAAGTAACGTTTTACGTGTTACCACATCCGTGTCTAAATGCTAA
AGCTATTAAAAAGGAACGGCTTATTGCTAATGATTTTTTACAAATTCGTA
AAGTAATTGAGCATGTATATGAGAAAGTTATGATGGAAACCGTCTCTTCG
GTTGCAGGAAGCCCCACGGGAGAGAGTAATCGTGATGAATCTTCTTCTTC
AATCGTATATGCAGAAGACAAAGTTGAGCTATTTTGTAACGATATTATTA
TTGATCCTAACATGGATCTTAGAACTGTGAAGCATTTCATATGGAAGTCG
TCTATGGATTTAGTGTTAAACTATAGACCCATAGGATAA
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