EMLSAT00000003577, EMLSAT00000003577-699424 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003577
Unique NameEMLSAT00000003577-699424
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1967supercontigLSalAtl2s1967:43528..44980 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003577 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003577EMLSAG00000003577-686343Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015588EMLSAE00000015588-724516Lepeophtheirus salmonisexon
EMLSAE00000015589EMLSAE00000015589-724517Lepeophtheirus salmonisexon
EMLSAE00000015590EMLSAE00000015590-724518Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770418auto770418Lepeophtheirus salmonispolypeptide
EMLSAP00000003577EMLSAP00000003577Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003577

>EMLSAP00000003577 ID=EMLSAP00000003577|Name=EMLSAP00000003577|organism=Lepeophtheirus salmonis|type=polypeptide|length=262bp
MTSKRDSLPFSFKALETTNPLLKDFSGYEKLLSRVIPGNWLXQHDFEESY
ASEIYNLELRDDDVWIITYPKSGTTWMQCILWLLLNDYEFPENQHLDDVS
PHLELTQGMSKKWIRSLLSSKYHDLEEGDPLRAYAKEFLENLDQTPIDLA
NNLPANKRRLIKSHLPFALLPPKILERNKVVFVARDPRDILISYYHHMSL
MKDSNFTGEFKDFFKYFICDEGRFLDLQVANDDVQNILEKVSIESMRNNL
SVDNSKIMIQLG
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mRNA from alignment at LSalAtl2s1967:43528..44980-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003577-699424 ID=EMLSAT00000003577-699424|Name=EMLSAT00000003577|organism=Lepeophtheirus salmonis|type=mRNA|length=1453bp|location=Sequence derived from alignment at LSalAtl2s1967:43528..44980- (Lepeophtheirus salmonis)
ACACTTTTTCTCAATTGTACTCTTGTCATTTTGATAATTCCATCAAAATG
ACGTCCAAAAGGGATTCACTTCCGTTTAGCTTTAAGGCTTTAGAAACGAC
CAATCCACTACTAAAGGACTTTTCTGGGTATGAAAAACTTTTGTCCAGAG
TTATTCCAGGGAATTGGCTGGMTCAACATGACTTTGAAGAGTCATATGCT
AGTGAAATATATAACTTAGAACTGAGAGATGACGATGTTTGGATCATTAC
TTATCCAAAGTCTGGAACAACATGGATGCAATGCATCCTTTGGCTATTAC
TGAATGACTACGAGTTCCCAGAGAATCAACATTTAGATGACGTTAGTCCT
CATTTAGAGTAAATTGAAAATTTACCCCTATATATATAATTCTACTTTTT
TCATTCTTTTATAGATTGACTCAAGGGATGTCGAAGAAGTGGATTCGATC
TTTGTTATCTTCTAAATATCATGATTTGGAAGAAGGGGATCCATTGAGGG
CTTATGCTAAGGAATTCTTGGAAAACCTGGATCAAACCCCTATTGACTTG
GCGAATAATCTACCAGCAAATAAACGAAGACTCATAAAATCTCATTTGCC
TTTTGCTTTACTACCTCCAAAGATCTTGGAGAGAAATAAAGTAGTTTTTG
TTGCTCGGGATCCAAGAGATATTTTGATTAGCTACTATCATCATATGTCC
TTAATGAAGGATTCAAATTTTACAGGAGAATTCAAGGACTTTTTCAAATA
TTTCATTTGTGACGAAGGTAGTAAATATTTAATTTAAAAATATAAATTCC
TATAAAAAACTGTATTTTTTGAAAATACTTAGTCGTACCTGGACCATATT
GGGAGTACATGAAGCAAGCTTACCAATATGTAGACCATCCCAATGTTATT
TATGTTCATTTCTCAGATATGAAACAGGTTATAATCAATTTAAATAATAC
ATAGACTATGAAAACTGACTGAAAAGTCAGGTCCTTCATACGTAATAGAT
CTTTGGCTATTTTTTTAAATTCACCTCATTTCCAATTGTTACCAACCTTC
AGAAGACGGCTATTTTTGTTATTTCCAAAACAATGGATCAAAAACCATTT
GATGTTTTAATTTTGCAGTCCCTCTCGATGGGGAACAAATACCGTCAAGC
TAAATAATGGTTTGAAAAGTGTTTATAAAAAGACTAAAATAAATTAATAA
TAATAACCAAAAGAAACTTAAAATAACTAAAAAAATAAAAACACACTTTT
GAGACAATGTGTTACAATTGGTAATGTAATTATCTCAAAAAATATTTTTT
CAGGATCTTCACAATGTGATACATGATGTTGTAGGATTTTTGGACTTGCA
AGTTGCGAACGATGATGTTCAAAATATTCTGGAAAAAGTTTCAATTGAGA
GTATGAGGAATAATTTGTCTGTGGATAACTCAAAAATAATGATACAATTA
GGA
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