EMLSAT00000003604, EMLSAT00000003604-699451 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003604
Unique NameEMLSAT00000003604-699451
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s197supercontigLSalAtl2s197:29645..30465 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003604 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003604EMLSAG00000003604-686370Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015700EMLSAE00000015700-724628Lepeophtheirus salmonisexon
EMLSAE00000015701EMLSAE00000015701-724629Lepeophtheirus salmonisexon
EMLSAE00000015702EMLSAE00000015702-724630Lepeophtheirus salmonisexon
EMLSAE00000015703EMLSAE00000015703-724631Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769865auto769865Lepeophtheirus salmonispolypeptide
EMLSAP00000003604EMLSAP00000003604Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003604

>EMLSAP00000003604 ID=EMLSAP00000003604|Name=EMLSAP00000003604|organism=Lepeophtheirus salmonis|type=polypeptide|length=207bp
MCMLPLCLTTSIRVIPLLVLNEPENIFTTLVYISSFTIGVVGVIFYSSLS
KFSSLYFRSASTTYPTGIAMICSNXGLVFASIIGPFAVHDPIPIINGKKN
IQDEIRNYLLLFAFIIGVIFMLVAFTFPEPIYDEMQDPSPSIKQNIFKIL
CDKDIVFLLSVNALSTVPIYWSSTFLPIYLQRYGFGQKITGGLMSLSIVL
RFKDTFF
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mRNA from alignment at LSalAtl2s197:29645..30465-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003604-699451 ID=EMLSAT00000003604-699451|Name=EMLSAT00000003604|organism=Lepeophtheirus salmonis|type=mRNA|length=821bp|location=Sequence derived from alignment at LSalAtl2s197:29645..30465- (Lepeophtheirus salmonis)
TTGTCTACTGTGATCAAGTATATGTGCATGCTTCCATTATGTTTAACAAC
TTCAATCAGAGTTATTCCTCTTTTAGTTCTCAATGAACCAGAAAATATTT
TTACTACGTAAGAAGAATGATTTATAATTACTTTTGCTTTCTTTATAAAT
TTCTTTTTTAGATTGGTTTATATAAGTTCTTTCACGATTGGAGTAGTTGG
AGTCATATTTTACAGCTCTTTATCCAAATTTTCGTCCCTTTATTTTAGAT
CAGCTTCAACAACATATCCTACAGGGATAGCAATGATATGCTCAAATRTT
GGACTTGTATTTGCATCAATCATTGGCCCTTTTGCTGTTCATGATCCAAT
CCCGATAATTAACGGAAAAAAAAATATTCAAGATGAAATACGAAATTATC
TTCTTTTATGTAAATTTCAATTAAAATTAATTACTATGATTTATTCTCGG
ACAATTTAGTTCTATCTTTTTAGTTGCGTTCATTATTGGAGTTATTTTCA
TGTTGGTTGCTTTTACCTTCCCAGAACCAATCTATGATGAAATGCAGGAT
CCATCTCCTAGTATTAAGCAGAATATTTTTAAAATTTTATGGTAAGTCCA
ATACCATTATTTATCATTTGATCGACTGAGCCACCCCCTTTTATTGCAGT
GATAAGGACATTGTCTTTTTACTCTCAGTGAATGCTTTAAGTACAGTTCC
TATTTATTGGAGTTCCACTTTTCTGCCCATATACTTACAACGCTACGGCT
TCGGACAAAAAATTACTGGCGGACTAATGTCCCTTTCTATAGTCTTAAGG
TTTAAAGATACTTTCTTTTGA
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