EMLSAT00000003609, EMLSAT00000003609-699456 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003609
Unique NameEMLSAT00000003609-699456
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s197supercontigLSalAtl2s197:44090..44989 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003609 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003609EMLSAG00000003609-686375Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015719EMLSAE00000015719-724647Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770466auto770466Lepeophtheirus salmonispolypeptide
EMLSAP00000003609EMLSAP00000003609Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003609

>EMLSAP00000003609 ID=EMLSAP00000003609|Name=EMLSAP00000003609|organism=Lepeophtheirus salmonis|type=polypeptide|length=299bp
MEEEDLPFKHRISMSKIRWIRTYFLSLSLFPLRVLSVLIFVILYWMAASV
TLLGKTESPMVGWRKKVKWIGVLFGRIAFRCMGLFPIIKGEPNPEAPVFV
LAPHSSFFDAFVVFWLGEIPSIVNRYENQNIPFIGKCIRMTESIFVTREA
ANSRQQTMQEIIYRVKNPAWPKLALFPEGSTSNRKALMPFKKGAFVAGAP
IQPVIIRYPNTVDTVTWTWDQSHGTKTVVWLTLSQIYTKVIVEFLPIYYP
SSSEQKDPILFGNNVRQVMAXALNIPVCQDSFEEVKRKYAHKYKSKKLD
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mRNA from alignment at LSalAtl2s197:44090..44989+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003609-699456 ID=EMLSAT00000003609-699456|Name=EMLSAT00000003609|organism=Lepeophtheirus salmonis|type=mRNA|length=900bp|location=Sequence derived from alignment at LSalAtl2s197:44090..44989+ (Lepeophtheirus salmonis)
ATGGAGGAGGAAGACTTACCCTTCAAACATCGGATTTCCATGTCCAAAAT
TCGATGGATTCGAACCTATTTCCTGTCACTTTCCCTATTTCCTCTTCGAG
TTCTGTCTGTTTTGATCTTTGTAATCCTCTATTGGATGGCTGCCTCCGTG
ACACTTCTTGGGAAAACAGAGAGCCCCATGGTCGGCTGGAGAAAGAAAGT
GAAATGGATTGGGGTCCTGTTCGGAAGAATTGCATTTCGTTGCATGGGTC
TTTTTCCCATAATCAAGGGAGAGCCTAATCCAGAAGCCCCTGTCTTTGTT
TTAGCACCTCACTCTTCTTTCTTTGATGCTTTTGTCGTCTTTTGGTTGGG
AGAGATCCCTTCCATAGTCAATCGCTACGAGAATCAGAATATTCCCTTTA
TCGGCAAATGCATACGTATGACTGAATCCATTTTTGTTACGAGAGAAGCC
GCCAATTCACGTCAGCAAACAATGCAGGAAATCATATATCGAGTCAAAAA
CCCAGCCTGGCCAAAGTTGGCCCTTTTCCCAGAAGGGTCCACTTCCAACA
GGAAAGCTTTAATGCCTTTCAAAAAGGGTGCTTTTGTTGCTGGTGCTCCA
ATACAGCCAGTTATTATTCGCTATCCAAATACTGTGGATACCGTGACATG
GACGTGGGATCAATCCCATGGTACTAAAACAGTTGTTTGGCTCACGCTCT
CCCAGATATATACCAAAGTTATAGTCGAGTTCTTACCCATTTATTACCCC
TCTTCCAGTGAACAGAAGGATCCCATTCTCTTTGGAAATAATGTTCGTCA
AGTCATGGCTGYTGCACTCAATATCCCCGTCTGTCAAGATAGTTTTGAAG
AAGTCAAAAGAAAATACGCTCATAAATATAAATCCAAAAAACTGGATTAA
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