EMLSAT00000003667, EMLSAT00000003667-699514 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000003667
Unique Name	EMLSAT00000003667-699514
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s19	supercontig	LSalAtl2s19:27570..32583 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000003667 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000003667	EMLSAG00000003667-686433	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000015959	EMLSAE00000015959-724887	Lepeophtheirus salmonis	exon
EMLSAE00000015960	EMLSAE00000015960-724888	Lepeophtheirus salmonis	exon
EMLSAE00000015961	EMLSAE00000015961-724889	Lepeophtheirus salmonis	exon
EMLSAE00000015962	EMLSAE00000015962-724890	Lepeophtheirus salmonis	exon
EMLSAE00000015963	EMLSAE00000015963-724891	Lepeophtheirus salmonis	exon
EMLSAE00000015964	EMLSAE00000015964-724892	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto769778	auto769778	Lepeophtheirus salmonis	polypeptide
EMLSAP00000003667	EMLSAP00000003667	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s19:27570..32583-

protein sequence of EMLSAP00000003667

>EMLSAP00000003667 ID=EMLSAP00000003667|Name=EMLSAP00000003667|organism=Lepeophtheirus salmonis|type=polypeptide|length=447bp
IQCLCGFQDTTFDHYDVRIELDGCNLQEKKCILNENGISSCFGTCETDGY
CIKSVAKNNGLIRTTYGCRNEFSLAPRDRPLICFSSEAKKSEFRVGCCGN
VSYCNANVTLSLQNVTNDEDALNFKNTILIYLTIALPICLVLMALILGGA
YFVWRRSFDLRCKSKGKNRGACSDAGSSTIKRLREDVPLIDESQQTLNEM
LEDTGTGSGSGLPILVQRSIARQVQLSEIVGKGRFGEVWRDNGTWTQLWL
VTDYHQQGSLFDYISRNVINSNQMLVMALSIATGLAHLHMEIIGTKGKPA
IAHRDLKSKNILVKRDGHCAIADLGLCVRHNAETETVDIPLNNKVGTKRY
MAPEILDESIHENHFDSWKRADVYAVGLVFWELGRRTNVGGIYEDYQLPY
FDVVDPDPSIEEIKKECLYHNSAARLTALRIKKTLANMDAINDKTKI

mRNA from alignment at LSalAtl2s19:27570..32583-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000003667-699514 ID=EMLSAT00000003667-699514|Name=EMLSAT00000003667|organism=Lepeophtheirus salmonis|type=mRNA|length=5014bp|location=Sequence derived from alignment at LSalAtl2s19:27570..32583- (Lepeophtheirus salmonis)
ATACAATGTTTATGCGGGTTTCAAGACACAACTTTCGATCATTACGATGT
TCGAATAGAACTCGATGGTTGCAATCTACAAGAAAAGAAATGCATACTCA
ACGAGAATGGAATTTCCTCTTGTTTCGGGACTTGTGAAACCGATGGGTAC
TGCATTAAATCTGTAGCTAAAAATAATGGTCTGATTCGAACTACTTACGG
GTAAGGACTAATTGTATCTATTGGTGTATATTCGTTACGTTTTATATTCT
ATAATAAATATTTACCAACTATGGACATAATATATATGTACAGTACGTTC
CAGCGAATAACAATTTTGATTACTCAACTACTTTCATATTCATTGACATG
GTGACAATATGCTTGATTTAAATTTGCTAATAGGTTAGGCAATTAGGCTA
CAAATGTATTGTGACTACAGTCAAACCTGTATTAACCAGTCAGGTTACGG
TAGSTTCAGGCAATCTCTTAAACTAAGTTTCTTATTTTGTAACAATTCTA
GGTTTGAAAACTGGATATGACCGCTTAGTGTAGTGATACACTTAAAGCAA
ATGGCTGTTAGGCCAGGKTTGAGTGTCTTCTTTTTAAATATTACCAAATC
ACAATAGCAAATTAGTCTTATAGAAAGTACTTCATTAATTATTTCATAAA
CTTAGACTATTTGTAGATTAAAAACCAAAAGTCAGGACTTGCATTAGGCG
TCTGTGATTGCAGTGGGCCCTCTTTTTCAATAGGCCTTGTTCTGGTTTGA
AAAAGAAATGAAATATTTATTTTTTAGAAAAAGATCATCTCAAAAATAGA
AAGRAAAGGAMAAGCCAAAAAGTTGATATTGCCTTCCTTGACTGTTACTG
TTAGAGTACCGTTGTTATACTCTATGACATCAAAATCTCTCTGTCTTGTC
CAGCAGTCAGTACGGTACATCAAATTGAAAATTCTACCAAGCTGGATTAC
ATGATTGTATGTATATCCCTGTATTTTTATTAACCTTGGGTCTCGCGTAA
TCCACTTTACATAAGCATCTGCATTAAATAAGACTAGCCATCTCGTAGTT
CGACATGAATGGAACTTACGTTTCTGAAGAGCTATTTTTATTCTCAGCAA
AAAAGCCTATAAAATTACATGATCTTATCGTTTTTCCAAAGGAGTTCCAT
CTTTGGTTTGATTTTAATTGTCAATAATTGGTACACACTGTATATACGTA
TATATTCATTTATTCGTGACATTTGCTATTAATTAGTGTGAAGGCCAAAA
TGGCTCCAAAAGAAACTGCATTCCATATAATTAGATAGCTTTACGGTTTA
ATCAATTTAATATAAAATAGTTTTTCTATTAGCAAAGAACAAGTTAGCCA
AAGATTTTATTAATAAAAAAATGCAAAGCAAAAGTGAAAACTAACATTTA
AGTAGGTACTGAATTAATTTTTGGCATGGTTGATAAATTTTAACATTACA
TAGGTGGCCTTAATGAATGTAAAACTCTAGTTTTATTAACTTATTTTTCT
TAGGTGTAGAAACGAATTCTCACTAGCTCCAAGGGATCGTCCTCTCATAT
GTTTCAGTTCTGAAGCAAAAAAAAGTGAATTCCGAGTTGGATGTTGTGGA
AATGTATCCTATTGTAATGCAAACGTTACACTTAGTCTTCAAAATGTTAC
TAATGACGAAGGTAAGGGCAGTAACCGGTTTATAATCCTACATACATATA
CTTCTGAAAGCCACACATTATACTAATGAAAATTCAATCATTCATTTTCA
GACGCTCTTAACTTCAAAAACACTATTTTGATATACTTAACTATTGCATT
ACCAATATGCCTAGTCTTAATGGCTCTTATCCTTGGAGGAGCTTATTTCG
TATGGCGACGATCCTTTGACTTACGTTGTAAGTCAAAGGGTAAAAATAGA
GGAGCCTGCTCTGATGCTGGGTCCTCAACAATCAAAAGACTTAGAGAAGA
TGTTCCACTCATTGATGAAAGTCAACAGACTCTTAATGAAATGCTGGAGG
ATACTGGTACGGGTTCAGGATCTGGATTGCCCATTTTGGTTCAGCGAAGT
ATAGCAAGACAGGTTCAGTTATCTGAAATTGTTGGAAAAGGGAGATTTGG
TGAAGTCTGGAGAGGTCATTGGCGGGGAGAGAATGTGGCTGTCAAAATTT
TTTCTACAAGAGATGAATTATCTTGGTGTAGAGAGTCTGAAATCTATCAA
ACTATCATGCTAAGGCATGAAAATATCCTAGGGTTCATTGCTGCCGACAA
CAAAGGTAAAAAAGTTAATCATAACCAAAGTTAATCGTACATATTATTGT
AACATATGTGTTCATCAACACAAAAACAAGCTCGTATTTTCTCAAAAAAT
AAATATTGATGACATTTGTATTCTCGATCTAATTATCTTACATTTTTATT
AATGAATTATTTTTGAGAAATCCTTCGCTTCAAGTATAAATTTGCACAAA
CTGCACATAAACATCGTAAAAATTCCTTTATCAATTATAGAAATATATTT
TAAAGGGCATATCGGAGCAAAACAAAGTTTTAGACTATAGCTAATATTCT
TGTGCATATTGATCCATCCCAGAGCTTATAATTTAAAGCCGATATTCCAC
CGAAATAAGTTTATATTAATGAATTAAAACAATGGATTTGGAATTAATTG
GTTTCTTGATTTATGTTTAAGATTGTTTTTATGTTGACAAATCCCATCTG
TAAATAGATTTAAAGCAATTCAGATCATAACCTAATTTACGTGAATTTGC
AGCAACTTTATTGAACTTTAAAAGAATTTTTTAAATCAATATAGTAACTA
TGGGGTTTTAATATGACCTAGTCTATGTAGATAAAATTGCTTTGTCTCGT
TGTTAAATTAAATGCAGCAAATTACAGTTTATTTTGTAGCTACTATCAAA
GGTATTAAACTTCATAGTGCTATTAAATATATGGCGAAGGAAATAGAAAA
GATTATATGTGTTAGAATATAGCTATGGGGAATTTACGAAAAGAAAATGT
GATAATTACGAAAATTGTAGCTTGTAATTATGTATGCGTATAAACTTTTT
CAATGTTTTCCTACGAAGTGCCTCTCTTAACTTATTGTAATGTAATAAAA
AACCATATTTTTTGAATGCAACTATAAAATTTTCCCCCTTTATTTTCAAG
ACAACGGAACTTGGACACAGTTATGGTTAGTGACAGACTACCATCAACAG
GGATCCCTTTTTGATTATATTTCTCGAAATGTTATCAACTCAAATCAAAT
GTTGGTGATGGCATTGTCTATTGCTACGGGTCTAGCACATCTTCACATGG
AAATTATTGGAACTAAGGGTTCGTAGGATTTTATACCAGAATATAAAATT
ATATTCACTTATAATTATGATAGGTAAACCAGCCATTGCTCACAGAGATT
TAAAGTCTAAAAACATACTTGTAAAGCGAGACGGACACTGCGCGATTGCA
GACTTAGGCTTATGTGTTCGTCACAACGCTGAAACTGAGACTGTTGATAT
ACCTCTTAACAATAAAGTTGGAACTAAGCGCTATATGGCTCCGGAAATAC
TGGACGAATCCATTCATGAGAATCATTTTGATTCTTGGAAACGTGCTGAT
GTATATGCGGTTGGACTCGTATTTTGGGAACTGGGTCGTCGTACTAATGT
GGGCGGCATATATGAAGACTACCAATTACCTTATTTCGATGTTGTTGATC
CAGATCCTTCGATAGAAGAAATAAAAAAAGTTGTTTGTGACAAGAAAATT
CGACCTACGATTCCTAATCGTTGGCAGACATCTGAGGTTTGTCGTGCTTA
TTATTGCCAGAGGGAGGGGAGTAACAGAGGACAGTTGCAACRGGCTCTTT
TCTCCAMCATCCACAAAATGTGTGATACCATTCTATAATATAATGCAGAT
TATTTTGGGACAAAAAATCAATAGTTTTTGTACATTTAGCTTTGAGATAT
TGGATAAAAACTGATTTTAAGGGATAAAATTAATTTTCTCTCATCAGGGC
GTCAGTTTTTCATTGTTTGTTTTTTATGTAACTTATACAATTTGATTATT
TAGAAATTACTTCCGTTAAAATAATTTTACCCAGATTCAATCATTAAGGA
GAGATTTGAGATATTGTAATGTTTAGTACTAAGAGGACAGATGCATCAAG
TGCTCCAATTTTCTTCTTAATACTTAATTATGNTATATATTATCACTTAA
CATCAAACATGTTTGTAGCCCAAACCAGGACCCTAAAGAGATTTTTGATA
GTGAATTTATTGGATCAATCATTCTGATCAGTGATCCATGATATATATCT
TTATCTCCTATCATAGATTGAAAAGTTTTGTAACTAATTTCTCAAAAAAT
ATTATTTAGTCAAATTTTACTAATGTATAACGCAAATTCGATTTTTTAAC
TCTTACAACCGGTTTCTTAACTAGTGCTGTATCAGTTCTTATTTATTCAG
TCCAGCCCAGTTTTAGGACCGGTCCTTCGGACTGTCGATACTGATTTAAA
AAAAGGAGAATTAAGGTTGATTCAATTTATCAAGGACCGAGCTTTAGAAA
TTTTTAGGACTGATATGCAGGACTGGACCGTACCGAGACTGAACTGGACG
GGACGGGAGTCTTCAGTTCTAAATAAGGACTGACATAATATATTTACCCA
TGGGGCAATTTCATGGGTTGTATTTATATTCATTTTGTGTGAGAATTACT
TACTGTTATAATCTTTTAATAGATTCCATCAATACAGACATATGTTGGTA
TCTTGTGTTAAATTTTTGAGTGTATGCATTAAACTAGTTACGGGTAATTA
AACAAAGTATCACAACTGTCCCCGTCTCCCCTATGATAATAATTATTAAT
GCACTGAAGCTTTTAAAATGTATTTTTCATTCCAGAATCTGAGATCTCTT
TCGAAAATTATTAAGGAATGTCTCTATCACAACTCAGCAGCCAGACTTAC
CGCCTTGAGAATTAAAAAGACTTTAGCTAATATGGACGCTATCAACGACA
AGACAAAAATTTAA

Add to Basket

Search form