EMLSAT00000003672, EMLSAT00000003672-699519 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000003672
Unique Name	EMLSAT00000003672-699519
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s19	supercontig	LSalAtl2s19:296882..302215 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000003672 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000003672	EMLSAG00000003672-686438	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000015978	EMLSAE00000015978-724906	Lepeophtheirus salmonis	exon
EMLSAE00000015979	EMLSAE00000015979-724907	Lepeophtheirus salmonis	exon
EMLSAE00000015980	EMLSAE00000015980-724908	Lepeophtheirus salmonis	exon
EMLSAE00000015981	EMLSAE00000015981-724909	Lepeophtheirus salmonis	exon
EMLSAE00000015982	EMLSAE00000015982-724910	Lepeophtheirus salmonis	exon
EMLSAE00000015983	EMLSAE00000015983-724911	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto776019	auto776019	Lepeophtheirus salmonis	polypeptide
EMLSAP00000003672	EMLSAP00000003672	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s19:296882..302215-

protein sequence of EMLSAP00000003672

>EMLSAP00000003672 ID=EMLSAP00000003672|Name=EMLSAP00000003672|organism=Lepeophtheirus salmonis|type=polypeptide|length=430bp
MLRAFDGMEFITTYGERLNYQPNPTLIQRRHFFGLCPVSFEILNAPKICS
GCLSIGYFSKEDQKKDWKEHKSTFKSGKPGEHPLTEDPAVRSKELQMLLS
NTFGRSLQQDESDMFNYPRLCSICLDGKQNSMVTCSDCHCAVYCSDVHLE
EDKEEHLKSCSQLKICLEDYREERIYLNHPSDSYLPRFARFGYEPLPPEG
IIKLLEPELTNMLFNSKTRIFPEIRYTSFRYTCPLSILYGLQTSVPDLSM
KDNLVIEIVGARIAETNDLTKWEIIPLRLPTLMSITFVFIGPEIEVDVET
PTIQGSSEYLKTCRPNLNQNFQFYKMDYEEFYNKKGKSCPLPDLVAVLNC
GFVFYSSWDASIPLMISRGSSLLFTEYYLEDAEFNLEKIEELWEEELNII
MEPQANPFSSMLPARIPTGFNFRKFKRRNF

mRNA from alignment at LSalAtl2s19:296882..302215-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000003672-699519 ID=EMLSAT00000003672-699519|Name=EMLSAT00000003672|organism=Lepeophtheirus salmonis|type=mRNA|length=5334bp|location=Sequence derived from alignment at LSalAtl2s19:296882..302215- (Lepeophtheirus salmonis)
TTGGAGTCCAAGTCGAGTCTTCGCTATCGAGTCCAGGTCATGTTACGAGC
CTTTGATGGTGAGATCATGTCGAATTGCAAGTCTTTAAAATATGGTCTCA
AGTCAATTTGCAAGTCCCCACCTCTGTTCTTCAGTCCTATAATTCAATAG
GACGATATTTAATCGATTTTATTCAACTTTTTTTAAAATATATTAGAATG
GATTTATTAGAAAAAAGGTTCCAGTGTTATTTTCTAATTTGATGTTCTTC
TTTTGCAGAGAATAATGAACGAATCCCAATCGATGATAAAATCAATCAAC
TCAAAGTTTCTGAAGAGGCTTCAATCTCAAAATCTGATTAAATTTGAGGA
TGAAAATCTGAGTTTATTGTATATTGAATGGAAAAGATATGTTGAGGTAG
GGACTGCCTTAAACGTCATAAGAATGAGATTAATTAAGACTTCATAGTCG
ATTTTGATTCTGGACAGCTACACAATGCAGTTACATCATATAGTATAACT
ATATTTTTTGCAGGCTGAAGTCATCAAGGACATGGAGTTTGATAGCATTG
ATGAGGGAGCCTTGGAGAGTTGGATGCATAATCTTCAAGACAAGGATGAG
GTTTTTATTAAGTTTAATTATTAGGGCATCAGCGAGCGTTATTTACTTAT
AGCCGTTTGTAAAAATAGCAACAGAAAGATTTGCCATCTTGTGGGAAAAT
AATACAACTCTCTGAATGATAATATTATTTATAGTGTTGTGTTGATCCTT
ATTTATTCGGTTCAGCTCAATGCAGTCTTTTACGACTGATAAGCAGGACT
GATCTGGACCAAGACTGAACTGGATTGGACTGCAGTCTTCATTCCTAAAT
AAGGACTGACTCAACATTAATTATCTGATAAAAAATAATATGTACGTCTG
TTTCTCCAATCTGTCAAAAAATTTCTAAGCATGCATCATTTTTTAAAACA
AAAGTAAAACCATCTTGCAGATAATATATTTTTTTTCAGTTTGCTCATAA
TCTATTAAAATTGTTAGAGAAACGCTGAAAATTATACATTATACCGAGAG
GTCCATTAAAATCTGAACACTTTGATTTTTAAACTTCAACAAGATATAAT
TTATTAATAAACAATATAATTTCAACAAAATTAATGCAATAAATAGATGT
GTGTCTGACCTCCCTTAATTTTTACTGTAACTGCCCTGTGCGCCAATGAC
AGCTTTCAGGTGGCGGTGGATATAGTCCTCTGTCATGGCGTCCCAGCAGT
GGCAGATAGTGGCTTTGAGAGCCTCGGTGTTGTGATTAAGGATACTGCAG
GTATCCTCGACCGAAAATGTATCGTCCAAGGGGTTGCATCAGGGTTGTAG
GGGGTCAAAAGTGTCAAAAAGAGTTCAAAGGACTCAAAAGATTATTGCAA
TAGATGATGTCAAAATTGGCATATCCACCCTCCCAAGTCTCTTTCCCCCC
ACTTTTTTGATAGCTCTCTTGGCAGTCTGGTGTGAAATCTCGAGATCGCA
TAGGCCCTCATAAACTTGAGGGGATTGGCCTGGGTTGTTTTCTTTAAATC
CTCCGGATTCTTACTCCCCAACGTTTCGTGGTGACGGCGTAGACAGTGGT
CTTGGAGACGCCCAACTGCTTGGATTGTGCAAATGGAAATTCTTCGAACG
CTTTCAAGTGTCATTTTCTCAACTTGTACGTAAGATAAAGGGCTCAGATG
TTGATTTTCTTTGTAATTAATTGTTTATGTTTTAATATATATCGAAATAT
GACTTAATTTCAATTACTCTACTTTCATTAATTATTGAATTAGTAATTGT
TCAGATTTCAATGGACCTCCGGGTATACCTACTAATAATTTCTCTTAAAA
ATAGATTAGTTTGAGTTATTGGACAAACATATTTCTGGAGGATTATATAT
TTTGGATGAAATCAATGGAAAATTCAGAGGATTTGAAGAGTTAAGATTTT
AATTCATTTTATAGATCTGATAAACTAAATGATTTATTAAACACTTTCTT
TAGGTATGGAATTTATCACGACATATGGAGAACGATTAAACTATCAACCA
AATCCTACCCTTATACAAAGAAGACATTTCTTTGGACTCTGTCCCGTCAG
TTTTGAGATTTTAAATGCTCCTAAGATATGTTCAGGATGTTTATCCATTG
GTTATTTTAGTAAAGAAGATCAGAAAAAAGATTGGAAGGAGCATAAATCT
ACTTGTAAAATACTTCAGACCATCGGTAATTTTATCGCTTTAGTATTTAT
TTTTACGAAGCTTGGATATAGAGCGGAAAATGAGCTCCATTCATGCTTTA
CGTTCATTTTTGAAAGATGTATAAAAATCTTTGAACAGAGTTCATTTAGC
TGTTTATTTTTCCGCCTACTTTTTTATTATTCTCCAACAACAACAACATA
TTTTAACCCAGGATTGAAGCTAAAAAACCAAGTGGCTAAACGATGTTTCA
ATAATCAATTATTTTTCAAATTTAATTGCCTACAAGAATACATTCTTGTC
TGCTAGGGGTTACTAAGTTTATTATGAATTACTCATAAAATTAAAGATGG
GATGTGTGTAAAGAAAAAACTAAGTATAAAAATTAGAGAAGAAAAAACGG
TTAATCCGTGCGTTCTATCTTCTTTTTTTTTCATTATTTAATCAATCGTA
GGCGTGTCAACATCTCCATTTAAAAGAAGAATTATCACCTATCTTTGGTG
TAAATTGTTTTTCAAATGCATAATTAAATACTTTTAAATATAATTAGGAT
ATTTTCCTTGCACTTATAAAATTTCAAATGTACAAGGTTCTCCTCTTTAT
TGCCGTAATTCATTTTCTCCAGCCAAAATAATATATATAACAGCTGATAT
TAAAATTGGGTCTTAATTCTATAATTCTATGTGTCTCACTCCCGCCTTAT
CCTCGCTCTCTTACACAAACCCCATTTCTACTCATACTATAAATAACTAC
ACAACCTCCATGAACTCACAAGGTGAATTCTTAAAAGATGAAGAAATCAT
ATAGATACAAGTATAGAGTGATGATGTTAAGTAGGAGTTGATGCTGTCGT
AGATGACCAAAGCATTCAAATTGTAATAGTAATGAATATGTATGTTAACA
ACATAGATGGCGCTTCAAATATTTTTTTCTTCGATCCTCAAAGTATTTTA
CATTTGATTATATTTTTCTTTATGGAACTCTTCTGTTTTCATTGAAGTAC
TGGACCAACAATTGTTACCTACTCATCTGTATAATGCAAATTTTGATAGG
TTAAGAGTTGTTTTTTTTATTTTTATTTCCTGTCAGCCTACGGAATTGTC
ACAAAAGGCCATCAGAGTGCAGATTTTGGCCTCAAGGAAGATGATAACCA
ATGTTTTCATGCTCCCCAATGATCTTCTAGACAATCTGGGGCGAAGGAGC
ACTGAAATATCTTCTCGTACTGAATGGTCATGGTGGCGACTACGACAATG
TTTTTCCTATCAATCGATAGTTAATTATGTGTTCTACAACATTGCTCATA
GAAAAATAGTAAAAAATGACTCTTAACCTCTCAAAATTTATATACTTGAG
ATGAGTAAATCCTAACGGTGTAGGATGATACCATATAAGCTCTCAAGTAA
TTGGTGTAGAAATAACTAAGGGATAATTTGAATTTGTCAACAGAAATTCG
ACATCTTTGAAGTGCTTATAATTTGAGATAATATCCAGGTTTTTAATGGA
TAAAGGGTGTATTAGTAGCTATTCTTGTTCATCAAACAGTATCTATTACC
AAAATGCATGCATCATGTGCTAAAATAATAAAATAACGTCATCTATGGTT
ATTTTGTAGCCTACTACATTTGGGAAAAAAAAATCGTTTTTAAAAACATA
TGAATGCATGGATGTAAATTTTTCAGAAAAAAATGGAAAAATATGAACCG
GTACAAGCCTGACTTTTATATACATTAAATCAAATCTTAAAATTAATTTA
TATTTCATAAATTCTAATTTTAAATATGGTAAGTTTATTTGTTGTAGTAT
TGCAGTTTTTAAGGACAATTCAAATTTATGAAAAAAACACTCATAAGCCG
TGATATGTATGATCATTTGTTTCTTTCAAACAGTCAAATCCGGTAAACCT
GGAGAACATCCATTAACGGAAGATCCTGCAGTAAGAAGTAAGGAATTGCA
AATGTTACTCTCAAATACTTTTGGAAGAAGTCTACAACAAGATGAATCAG
ACATGTTTAATTATCCCCGACTTTGCAGTATATGTTTAGATGGGAAACAG
GTAGAATGGTGATTTTTAACCTCATTCTTTGTTATATCTATATTTGTATA
CGTTTTGAAGAATTCAATGGTGACTTGTTCAGACTGTCATTGTGCTGTAT
ATTGCTCGGATGTCCACCTCGAAGAAGACAAGGAAGAACATTTGAAAAGT
TGCTCTCAATTGAAAATATGTCTGGAAGATTATCGGGAAGAAAGGATATA
TTTGAATCATCCATCCGACTCCTACCTTCCAAGATTTGCAAGGTATAACA
ATTTCTTAGTAATAATCGTCAAAATACTCATATTTTTATAAATAATAAGA
TTTGGATATGAGCCTTTGCCTCCAGAAGGTATTATCAAGTTACTAGAGCC
AGAGTTAACTAATATGTTATTCAATTCGAAGACAAGAATATTTCCTGAAA
TTCGATATACAAGTTTTCGTTACACATGTCCTTTATCCATCTTATACGGC
CTTCAAACATCCGTCCCAGATTTGTCGATGAAAGATAATTTAGTCATTGA
AATTGTTGGAGCTCGTATCGCAGAAACAAATGATTTAACCAAATGGGAGA
TCATTCCACTTCGTTTACCAACGCTAATGAGTATTACTTTTGTGTTCATT
GGACCCGAAATTGAGTGAGTCAAGAAATTTCTCTCTATATACATATACTT
GTATTCCAATAAATTATTTTACTTACAGAGTAGACGTTGAAACTCCAACC
ATTCAGGGATCCTCTGAGTATTTGAAAACATGTCGTCCAAACTTAAATCA
GAACTTTCAGTTTTATAAGATGGACTACGAAGAATTTTACAATAAGAAGG
GCAAAAGTTGCCCACTACCAGATTTAGTAGCTGTTCTAAATTGTGGTTTT
GTATTTTATTCATCCTGGGACGCCTCAATACCGCTCATGATATCCCGAGG
GTCCAGTTTACTTTTCACGGAATATTATCTTGAAGATGCAGAATTCAACC
TTGAAAAAATTGAGGAACTCTGGGAAGAAGAACTCAATATCATTATGGAA
CCTCAAGCAAATCCGTTCAGTAGTATGCTTCCAGCACGAATCCCTACAGG
ATTCAACTTTAGAAAATTTAAACGGAGAAATTTT

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