EMLSAT00000003680, EMLSAT00000003680-699527 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003680
Unique NameEMLSAT00000003680-699527
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s19supercontigLSalAtl2s19:587822..589042 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003680 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003680EMLSAG00000003680-686446Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016015EMLSAE00000016015-724943Lepeophtheirus salmonisexon
EMLSAE00000016016EMLSAE00000016016-724944Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778760auto778760Lepeophtheirus salmonispolypeptide
EMLSAP00000003680EMLSAP00000003680Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003680

>EMLSAP00000003680 ID=EMLSAP00000003680|Name=EMLSAP00000003680|organism=Lepeophtheirus salmonis|type=polypeptide|length=144bp
MSRLEEEVSKLQRLLKRTKSENGDSNKSDDEPPTNPVAHTENQRGMIELP
REKYKEMEFDLKRKSDLLNEVKVLLKQAATRERAQTSESEDLKKKVELLT
QVDPKSPSHILAKELRLSKLTIERLENVLLKIKARPKKNLLYNL
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mRNA from alignment at LSalAtl2s19:587822..589042+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003680-699527 ID=EMLSAT00000003680-699527|Name=EMLSAT00000003680|organism=Lepeophtheirus salmonis|type=mRNA|length=1221bp|location=Sequence derived from alignment at LSalAtl2s19:587822..589042+ (Lepeophtheirus salmonis)
ATGTCTCGCCTCGAAGAAGAAGTTTCCAAACTCCAACGACTTTTAAAGAG
AACAAAGTCCGAAAATGGAGATTCTAATAAATCAGATGATGAACCTCCTA
CTAATCCAGTGGCCCACACTGAAAACCAGAGAGGCATGATTGAACTACCT
CGTGAAAAATATAAGGAGATGGAATTCGATTTGAAACGTAAATCTGACCT
TTTAAATGAAGTTAAAGTACTATTAAAACAAGCGGCAACACGGGAAAGAG
CTCAAACATCAGAGAGTGAGGACTTGAAAAAAAAAGTTGAGTTATTAACT
CAAGTGGATCCAAAATCTCCATCTCATATATTAGCTAAAGAGCTTCGACT
CTCAAAGTTGACCATTGAAAGACTTGAAAGTGAGAAAAAGGAATTGGAAC
ATCAAATAGAGGTTTTGACAAGAAAGATTTAGATAAAACTCATTTAGAGA
GCGTTTCCATGTTGTATGTGACGTCGCGTTATTGATGTTAGCTATTTTGA
AGGACTAAACGTCCTTTTTTTTATAACAATAAAAACAAATTTTTCATTCA
TATTGATCAAAATAGTAAACAAAAGTCCTTGTATTGTGATGACAAATGGT
ACAAAGAACTCAAACGTGTCTGTTTATCAAAAAATTATCCTTCTAATTCC
TAGTTTTATTTAATATCAGACTCTTCTTTTTACTCGGTTTTTCTAACTCC
ACATTGTGAGTGATCCTCTTAAATAATAAAAATGTGTAAAAAAATATGTT
AATCCATCCTATACAATCTTAATCCTTAAATAAATTCATTATTACAATGG
GAAGAATAGGATATTTTTATCTAATTACCCTACTTTTATCATCCCTAAGC
AATCCATAAAAAATAATTTTATAAATCCATTCATTTCATAGGGATTTTCA
CAGTACCTATCAATCTGATTTAATATATACCTATCAAGAAATAGGTATTT
GATGCAGTTTTTTGGACTTTTTGTATTCTTACAACCATTTGATTCATTTA
TTCCAAACTTTCCAACTGACATCCAATTTTGTATTTTTAATTATGGAAAG
ACCATCTCAAGACCAGGAGCGTACGCAGGGACTGGGCTGAAGGGGCTTGA
GTCTATCCCAAAATTTTAAAAGTAAAACAGGTAGAAATATCTCCATTTTT
CTTTTCTTTTAAAAGATGTATTGTTAAAAATTAAAGCTCGACCCAAAAAA
AATTTACTCTATAATCTTTAA
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