EMLSAT00000003696, EMLSAT00000003696-699543 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003696
Unique NameEMLSAT00000003696-699543
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1supercontigLSalAtl2s1:1935596..1936166 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003696 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003696EMLSAG00000003696-686462Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016089EMLSAE00000016089-725017Lepeophtheirus salmonisexon
EMLSAE00000016090EMLSAE00000016090-725018Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780908auto780908Lepeophtheirus salmonispolypeptide
EMLSAP00000003696EMLSAP00000003696Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003696

>EMLSAP00000003696 ID=EMLSAP00000003696|Name=EMLSAP00000003696|organism=Lepeophtheirus salmonis|type=polypeptide|length=170bp
MNNLFRSYSLIAILVGISSGEDACEESLDTGHGNCYSKTPGARYYYNYNS
GNCEMFEYLGCEGNENRFTSEDTCLKTCAYTHNDDDNEEEISEFGDVYVI
NNGIVDDIHLTLFSEDKLSKGWFSHGSNIIXXSEIQNIXNMNQTSDSAKE
YALIPADMRKTQLSTKIMSL
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mRNA from alignment at LSalAtl2s1:1935596..1936166-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003696-699543 ID=EMLSAT00000003696-699543|Name=EMLSAT00000003696|organism=Lepeophtheirus salmonis|type=mRNA|length=571bp|location=Sequence derived from alignment at LSalAtl2s1:1935596..1936166- (Lepeophtheirus salmonis)
ATGAATAATCTATTTCGTAGTTACTCTTTAATTGCTATCCTTGTAGGCAT
TTCTTCTGGAGAAGATGCATGTGAAGAATCTCTTGACACTGGTCATGGAA
ACTGCTATTCTAAAACCCCTGGAGCACGATATTACTACAATTACAATTCA
GGGAACTGTGAGATGTTTGAATATTTAGGATGCGAAGGGAATGAAAATCG
TTTTACAAGTGAGGATACCTGTCTCAAGACTTGTGCATATACGCACAATG
ATGATGATAATGAAGAAGAAGTAAGATTTGATGCTATGTATATAATTTGA
TTCAATATGTAAATATTTAATTATTATTTAGATATCTGAGTTTGGGGATG
TGTATGTCATAAATAATGGAATTGTGGACGACATTCATTTAACATTGTTC
AGCGAAGACAAATTATCCAAGGGATGGTTTTCCCATGGTTCCAATATTAT
AAAWAWAAGTGAAATCCAAAATATAGWGAATATGAACCAGACCAGTGATT
CTGCTAAAGAGTATGCTCTCATTCCTGCAGACATGAGAAAGACACAGCTC
TCAACTAAAATTATGTCATTG
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