EMLSAT00000003704, EMLSAT00000003704-699551 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003704
Unique NameEMLSAT00000003704-699551
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1supercontigLSalAtl2s1:241123..242746 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003704 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003704EMLSAG00000003704-686470Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016109EMLSAE00000016109-725037Lepeophtheirus salmonisexon
EMLSAE00000016110EMLSAE00000016110-725038Lepeophtheirus salmonisexon
EMLSAE00000016111EMLSAE00000016111-725039Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775130auto775130Lepeophtheirus salmonispolypeptide
EMLSAP00000003704EMLSAP00000003704Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003704

>EMLSAP00000003704 ID=EMLSAP00000003704|Name=EMLSAP00000003704|organism=Lepeophtheirus salmonis|type=polypeptide|length=234bp
MSSKGRIGAEVRWEDLRKEARRLENEIDSKLVTLSKTGSEFGAESYYSQD
RLLSANEDNSSITNKIQDLESSLDRLSSINDLLSESTSSSGSTGRHILQR
HREILSDYQQEFRKTKAHIESIIQRQDLLSSNSSNIYHKPNEEMESLLME
NESVRNSERLLDEQINIALDSRETLISQRQAFKAMRKKLNDISNRFPVIN
NLVHKINLRKKKDAVILGSVIGFCLLFFLWYMFG
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mRNA from alignment at LSalAtl2s1:241123..242746+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003704-699551 ID=EMLSAT00000003704-699551|Name=EMLSAT00000003704|organism=Lepeophtheirus salmonis|type=mRNA|length=1624bp|location=Sequence derived from alignment at LSalAtl2s1:241123..242746+ (Lepeophtheirus salmonis)
CTATCACCTTAGAGCATTGACGAAGTCGAGAACAACGTCACTCAGTCATC
TTATAAGCTTGTATTGCTTACGTATAGACATAGTATATCCGTATGTGTGT
AAATATTGTATATTAGTTAATATTTTTTATTAATAATTATAATTTATATG
TTAAGTGATAAATTTGATCATACACCGACATATGCGCCTACTATTAAAAA
TCTGCTGAAAGTGAATCGACGTTACTCTAGCTACCCTACTGGCTATTAAG
TATTACAACTACTTCATTGTACTTGAGTTGATAATACTTAAAAAGTTAAA
AGGAAAAGAGAAATTCCTAGTCCTTCTCTGAAAACGCTGGCAAAAGGACC
AATGTCAAAAAATTGAAAAACAATTTATTTATAAGAAAATGTCGTCGAAG
GGTCGAATTGGTGCTGAGGTTCGATGGGAGGATCTAAGAAAAGAGGTAAT
TTAGAGTATTACAACAGTGTCTTATCAACGGTTGTACTCAACTTTTTCCT
CCTTCATTTTTTAGGCTCGTAGACTCGAAAATGAAATCGATTCGAAACTT
GTCACCCTTAGTAAAACAGGATCCGAATTCGGTGCGGAGTCTTATTACTC
TCAAGATCGACTCCTCTCCGCTAATGAAGATAACTCTTCTATAACTAATA
AGATACAAGATTTAGAATCATCTCTTGATCGTTTATCTTCTATAAATGAC
TTATTATCGGAGTCTACTTCTAGCTCTGGGTCCACAGGGCGACACATTCT
CCAACGTCATAGAGAAATTCTTTCAGATTATCAACAGGAGTTTCGAAAGA
CTAAGGCTCACATAGAAAGTATCATTCAAAGACAAGATTTACTTAGTAGT
AACAGTTCTAATATTTATCATAAACCAAATGAAGAAATGGAGTCTCTTCT
AATGGAAAATGAATCTGTACGTAATTCTGAGCGATTGCTTGATGAACAAA
TTAATATTGCTTTGGATTCAAGAGAGACTTTAATTAGTCAACGCCAAGCA
TTTAAAGCCATGAGAAAAAAGTTAAATGATATAAGCAACCGATTTCCAGT
GATAAATAATCTTGTTCATAAGATCAATTTACGAAAAAAGAAGGATGCTG
TCATTCTAGGATCCGTGATAGGCTTTTGCTTGCTTTTCTTTTTGTGGTAC
ATGTTTGGATAGAAAAAGTAACTATATCTTCCGTTGTTTGACATGTTAGT
ATATATAGCTATGTAATACATCTGGTGTTTAAGTACATTTTATGTTTGAG
AAAATTAGTGGAKTATCCATTCGCTATTATACAAAATTGTCTGTTTTTAT
TTTCTGTATGAATGCTGATCCTTCAATTGAAAGGGTTCTGATATTTTATT
TTTATTCATAATTTTGTATATTTTCATTTAAAAATATATTTTATTTTTAA
GATATAATCAAATGAATTTTAATATTTTTAATGAGGGGGAGGGGAAGACC
CAGCTTCTCCAGTTATTTCAAAAATTTATTAAATATTTATCAAATGAAGA
ATTACTTACTTGTTATTGTGCCTTATTTTTCGAATTCATTTAATAAAAGT
TAAAACTATGTCAAACTTATTTCGTGAGTATTAATCAAATATATTCTATC
GTAATTTGTTTATGGTTTTGAAGT
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