EMLSAT00000003714, EMLSAT00000003714-699561 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003714
Unique NameEMLSAT00000003714-699561
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1supercontigLSalAtl2s1:3257282..3264068 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003714 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003714EMLSAG00000003714-686480Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016153EMLSAE00000016153-725081Lepeophtheirus salmonisexon
EMLSAE00000016154EMLSAE00000016154-725082Lepeophtheirus salmonisexon
EMLSAE00000016155EMLSAE00000016155-725083Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780991auto780991Lepeophtheirus salmonispolypeptide
EMLSAP00000003714EMLSAP00000003714Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003714

>EMLSAP00000003714 ID=EMLSAP00000003714|Name=EMLSAP00000003714|organism=Lepeophtheirus salmonis|type=polypeptide|length=148bp
MYKDKLANICLFKDIRDDVKKDLDGFISSNKLKEIRSNRHLQPAPTPLIK
DTTTDMQMTTPSYSYSSTKEPLSSSYSPKREPTFPLEVSIPVQREYNVRP
YTRENKFTSPSGFAVSSHTYSVQQTRQSINIQPAGTYSKYQTNTYRLN
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mRNA from alignment at LSalAtl2s1:3257282..3264068+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003714-699561 ID=EMLSAT00000003714-699561|Name=EMLSAT00000003714|organism=Lepeophtheirus salmonis|type=mRNA|length=6787bp|location=Sequence derived from alignment at LSalAtl2s1:3257282..3264068+ (Lepeophtheirus salmonis)
AGAACAAGCATGCCTTTACCAAATTATGGATATAATAATGAAGAAACTAA GCAAAATCAGGAGTTGATCTTTGAAATGCCACCAAAAATTGTAGAGTCAA ATGAGGGATGTTGTGAGAAAAACAATCGGAAAAAAGCACAAATTACAACA GGTGTAGTAGTACAAATAACATTTAAAGCATAAATAAATGAATTAAAATG TCTAAAAATAATAATAGATTGGAAGTATTTTTTATTTCATGTGGGCGAAA TTAATTTACGTTGAGTCAAGTTGACCATAACAAGCCATATAAATTATTCT TGTTTTTGTATGTTTCTGTTTAAAAGATATTAAATATTTAAAGTGCCTCC ACCTATTTACAGGTAACTTGTGTCTTCCAAAAAAACATATCACTCATGAA ATTGTTACTATTATTTGCTTCACACTCGAAATATTTACTAACTATGGAAG TGGTTCTCAATATTTATTTACCCTTATATTGGTTTTTCCTTTTGATTAAT TATCTCCACTGTCCAAAAAAAAATTACTTTTTTTTGTGGTCTGATGTCGA AATAGTCTAAACTTCAGATAATTTAAGAAAAAAAAGACAAATATATTATT CTAAAACAAATTATCAGATTAAATAGTGGGAAAAGGAATGGCATAAATAT CAAATTTGAAGTCAAACGATGCAGTTCTTTAAAAGTCCTAATCATGGATG GGAATTGGAATCACATACTAAAACGTCTCCCAAAAAAATTGTGAGCTATG TTTCTGGCCACATTCTAATGAAAATTCTGTTTGCAGTTACTCTCCAAAGT TTCCACCATTTTGGACGCGTAGTTGTTATGTAACAGTCGTTTGAGTGAGT TGATGTGAGTGTTTTTGTGAAATGTTTTTCTGAATTGTTTATTAATTTTC TACATAATATCCCTTAGTAACTCTTTAAACTTCTTCTAGCGAAGTCACAG ATGAATTGGGTTATAGGGACGGGAGTATTGTCGATACAAAAATGTGTAGA GTTATAAGGAGACTATGTTGAAAAATATTTAAAAAAATCCTAAAAGCTCT TACATCAACTCACTCAAACGACTACTACATAGCAGCAGCGCGTCCAAAAT GGCGGAAACTTTGGAGAGTAACTGCAAACAGAATTTTCATTAGAATGTGG CCAGAAACATAGCTCACAATTTTTTTGGGAGCCGTTTTAGTATGTGATTC CAATTCCCATCCATGATTAGGACTTTTAAAGAACTGTATCGTTTGACTGC AAATTGGATCAATATGCTACTCCTGTTCCCATCTAGCGGTTACTAATTTT TACCTTCAACGTTGTCTGCACAACTTGTATATGTGATTGATAATTCATTT GGTACCTCAATTTAGCCACGACATCCACAAATTCGTTCCAAGTGTTTCTG TCATGAACCCTTACCCATTTTATATTTATGGGTCGCTTTGAAATTCCAAT CTCTTTCAAAATACATTGTACATCAAAATATATCCTCAGTTATTTGTTAT TCTATTTTTTGATCGAGGTTGAGTGAATAGGTGAACATAATTTAGATACA TGTTTGATATCACTGTCCAACAGCAAAAATGGCACAAAAACAGTATATGC TCTATTTATTAGAATTTGCTCCCCTGATTCCAAATATGCTCTTATTTTTT CTCTCATAGTATTCGTATGCCCCAGGTAGAAGAGATAGAAATAAAGAAAG AGAAGAAGAAAAGAGATAGAAACAAAGACAGAGAAGAAGAAAAGAGATAG GAACAAAGAGAGAGAGAAAAAAAAAGCATTTGCTCCGAGGATTCCCTTGA ATGTCCGTTTTTTGGAATCCCTTACTCACTAGGTGTATGTAACGTGTCCA TGAAGCTTGAAATAATTTATTTATAGTTTGAAACATGAGGCTTAATGTTA TAACAAATTGTATAATATATATTTTCTTTTTCTCTCTCTTTGTTTTTATC TCTTTTATTCTTCTATATATTTGTTAAAAGTATGATGCAGACATTTAAAA AATGGTTTTAGAATTTTTTAGCATTCAAGTTTAAAATATGTTAACATAAT TTATCCCTACCTTCAACACTGAGGGCTTACAACAGCTTTGAACCTTAAAA ATAGCCAAAAATAACAAAAAATGTATGACCTTTTTTGAAGGCCACGACGC TAGGAGAGAAAAAATAAGACCATATTTGGAATCCAGAGATCAAACTGAAC TAAGTTGAGCATATGTTGTTCTTATGCATAAAAAAAAAAATGCTATTTTG TTGGATAGTGTATTTAATTGTTATTTGAAATGTTGATTTTGGCCTCAATC CATAGCGTCTCTTTCGGGTGAATTTATTACAATTTGAGCAATTGATTTAG TTTTTGTAAATAAATTAAAGGTTTAGGCAAATTACATAGTTATGGTTTGT TTTTCAGCTATTTTTGAGATTAATTTTAAAAATACTTAGTCTTGAAGAAA GGGATATACATGATATTTTAAAGTCTCATGTTTAAAATTCAATTTATCCT TGTTTGAATTAGAAGATTAATGTTTGTTTTTTTCTTCAGAGGCTCATAAA TCCAAGAAGAAATAATTTGATACTGTAGAAATAGCTCATTTGAAAGTTAA AAGTATAGAATTTATTTCCAAATAAAGAATCTTTTAGAAAATATTTTATA TTCTTGTCAATTTGATGGCTTTTATCTGAAGAATCTGAGTATGATCGTAG AATATGAGTCTCTAAATTCAAATATGGTCGTAGCTTTTCCCTAAGTTCAT TGTTTAAATAAGGTCATTTTTACAGTTGAATAGTTTTATTTATATATTAT TAATCCTCTCTTCAAATAATGAGAATACTTTAATTTTATAATGAAAAGTG CTTATTTATTTTTAAGGAATGCCAATACTTTATGCATTAAATAGTTTAAA TTGCATCTTTGATCTATTTTTTCATGTTTTCTATTAATTCTAGATTTTCT TTTCTGATTGCTCTTACCTGGGGAAACATAAATATAATCTTAATAGCCAA AATTTAAGTTTTTTTGTTTTAAAGACATCAACATTTTTGTACAAGTCGTA TAAGCAAAGTGTGAAAGTTGTTACCAAAAAGTGAGCTGAATTTTAATAAA GTATTTACAGTGCTTGGGATGAGAATAATGCAATAACTGAATATTTCATA GATTATCAAAAAATTAAAGATGTCATTTTGGACTATTTAAAAAAAAAATT TTAGTATTATGTGGCACATTGTAAACTTCAAATACCCAAAGTTATACTAC TCATACATACATGATAGCCATGCAATTTTAACGAATCAAAATTAAACGAA GGTATCAATTAATATTTGGTTATTAGAAGGATCCATTTGGAATTAAATAA TGCATTTTAAGACAAAGAAATTGAAACTTCTACAATTTGATTATACAAGC TGGAACTTGTACATACGTCTCAACTTGTATAGAGTATATATTTCCAGTAA GCTTAATAAATATTCAAAATATGTTTTGAAGCAACAAATCTTAAATTTTA ATTTTTTAAGCCTCTGTTTTCAATAATATGAAGTCTTCACTCTTGATTTT AGAACCAACTAGGCTTTTTGTCGATATGATAAAAAATTTGTTAGATTTGG TAAAAAAGGGTCCATTTTTTGTACTTACAAGTAGTGGTGTGTTAGTATTC ATATATTCGGTCCAGCCTTGGACCGGTCCTATTAGTCCTTGGAACCGGTC CTTAAGACTGTCAATCTTTCAGAATGTCAGTACTGCTAGAATTGATTAAA AAAGAAAAAATAAGGTTGAGTGACGTATAACCTTATAAGTTTTAAAACTG ATATGCAGGATTGAACTGTACGGGACTGCAGTCTTCAATTGTAAATAAGG ACAGACACAACACTACTTACAAGACATTTTTCCCATTCAGAAAATAATAT AAACATAATCAATATATATATTTTTTAAACTGGAAACATAAACCTAATAT ATATTTTTAACGTTTTTTTTCTTTTATTTATTTCTCAAGGCAAAAATTAC ACAAACTTATGTAGTTGTTGGGATATATATTTTTCCAAAAAGCACTTTGT AGGCAACAAACCAGAAATTTAGGGTATTAAAGGTCATTTTCATATTTCTT GGAGTAATAACAATCATGAAAATGTAATTTCAATCAATGGGAGGAGGGGG AGAAGTTTAAATTTTGTTGACTAAAGTAATTCATAATTACTCCAAGGATA TTCGAAAAAAACTAAAAACGAAATAATAAAAACAAACCAGGAAATAGGTT GGAGTTTACACTGTATAAGTTTGCCTGCACGTCATTTTTTCTCTTTCTAT CTTAAAATTGAAGACGGCGATAGAGGAAAGTTAAAATTCAAATATCACCA CCTTTTAAGAATAAGGAAATAACTTCGTTAATCGAAGAATATATTATAGA AGAGTGGGAGGAGAGGGATTTCGATTTGTTCGATATATTCGTACAATTAG CACTTTGGAGGATCATGAAAATAAATGGAATGTCTCATTATGTGGAGAAA ATAGTGTTTTTGCTCTGAAAAAAGAGTATTAGACGATTAGACGTCCCTGT TTCAAATTTCGAGATTGAAAGAGAAATTATGAAATTAGGGCAAACTTATA AAATGTACCCCCAAAGAACCCATGAAAGTAATATAGGGTGAATACCATTT GACCCCCTAAGTTTTATGTTCACAATGATAGCAAGGCACTAAACTCAGAA TAGTCAATTATAGTTAACTTCTAACTTTTATTAAAAATAGACGTATAGTA TATTCAATAAAGAAGAAATGTCAAGTAATCTCTCTGTTGGAAACTTATAA ATCTATTTAAATATTTAAGAAAAATATTATTATACAAGGAAACGTTATAG TAAAATATTCAAATAGCCGTGTTATTAACATATTTTGCTTTTTTTTAGGG AAGCTAGGGATTGAGTTAGAGAGAAAAATGGTTATAAACAATGAAGATCC AGATAATATATGGAAATCCACAAATGTAAATCCTGAGGACCTTGAATCTG CAAAGAAATATTCGGAAACCAAGGTAATTTTATGCATAAATTAATAAAAT GTATAAAGATAAATTAGCCAATATCTGCTTATTCAAGGATATCAGAGATG ACGTGAAAAAGGATCTAGATGGATTCATTTCAAGTAATAAGTTGAAGGAA ATACGATCAAACCGACATTTACAAGTAAGAGTAAATAGTTTTTATATGAA TAGTTCCATGAATCTATATGAGGGCCATCAACACAACATCAAAATAGGAT GAGTTAGCTCAAAAATGAGCTTATCATTTGTAACTCTTGAAGAATATAGA TTGTATTTTTTTAATGAATTTGTTGTATTTATTCTATGTGAATATAAATA TTGCAAAAATTAGTGGTAATTAGGATGTTAAATTATCTGAAAAAAAATTT AAATATCGTAAATTTTCATTTTTTGTCGAACGATAACCAAATAGTTTCGA TTTTTTTTTATAAAATAAAAGCTAAAACATGTTTATGGTCAAGGTGACGT TTAGAAAATAATTTTTATTTTTTTCAAAATCTTTTATTTTAGGAAAGAGT ATTTATTAATTTTATCATATAATTTTTTTATTCGATTGTTCGAAATATCA AACTCTAGATCCAAAACGTCGATCGAAAAAAATTAATTAAATGTAGATCA AACAGTAATTTAATATTGTTTATTTTAATAATATTTTTACGATCATTTTT ACGAAAAAAAATAATAATAATATGATAGATTATTAAAAAAAAAAATGAGC AAYGTAAATCAAATGTTTAATTAAGTTACCCTCAAGGGTGTTGCTAGCTT TCATTGGATGGRAGGGGATTATCTTCAAAAATTATCAACACTGTAATATA AGTATTTATATACATTTGTGTACACATGAGCAGAAAGTCGCGGGCTTAAC AAAGAAAATCGTTTGACTTTTTTTAAAATTATTATTAACATTTTCGCTAT ATCATAACTCATAAAATTTTAACAGCAGTCTTTTGAAGGTTGGTACTAAC TGAAAAAGAGGTGACTTAAAACAAAATAACCCCATCTATGTGAAGTCCGG GGTTTTTCAGTCCATCTGTTATATGATAAAAGTTTTAGGGGCTAGCAACC CCACCGGTTAACATTTTTTAGTATTGCAACCTATTCCTGAATTTTGAAAA GAAAGTCCATTTTTGATTAAAATATTTTTATGAGATTGTTGGATCGTCGT ATATTAAAGTACAAATGGATTAACAAAAATTTATTATTTTCTTGTTGTTT GTTGAAGCCAGATTTTTTTTGGACGTTTATCATAAATATGTTTTATTATA ATTAATTACCTTTTGAATACGTATATAGTAATAATCAATAAAGTATGATT ATAAATTCCAATTCATTTCCAGCCGGCACCAACTCCATTGATTAAAGACA CAACGACTGATATGCAAATGACTACCCCATCTTATTCCTATTCTAGTACG AAGGAACCTCTATCCTCTTCCTATTCTCCAAAGAGGGAGCCTACATTCCC ATTAGAAGTATCCATACCTGTTCAAAGAGAGTATAATGTGAGGCCTTATA CAAGAGAAAACAAATTTACATCTCCTAGTGGATTTGCTGTCTCTAGTCAT ACATATTCTGTGCAACAAACTCGCCAATCTATTAACATACAGCCCGCTGG AACTTATTCCAAGTACCAAACTAACACATACCGTTTGAACTAAATCCTTA AAATATATATCCTCCGTTGCTCATACTAAATTAACCTTTTCTACTGCATT TATTCTATTGATTTAATTTAAAAATAATAACATTGAT
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