EMLSAT00000003731, EMLSAT00000003731-699578 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003731
Unique NameEMLSAT00000003731-699578
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1supercontigLSalAtl2s1:3379623..3380188 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003731 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003731EMLSAG00000003731-686497Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016261EMLSAE00000016261-725189Lepeophtheirus salmonisexon
EMLSAE00000016262EMLSAE00000016262-725190Lepeophtheirus salmonisexon
EMLSAE00000016263EMLSAE00000016263-725191Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780994auto780994Lepeophtheirus salmonispolypeptide
EMLSAP00000003731EMLSAP00000003731Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003731

>EMLSAP00000003731 ID=EMLSAP00000003731|Name=EMLSAP00000003731|organism=Lepeophtheirus salmonis|type=polypeptide|length=96bp
MYKLRLDFLLKLEITKESYQDNLLKNISIPDGRSLFSPFGTLSLSIMLSQ
ECYLVNLVWIIVHWKNISPGGYHVFITLTLWSTTFYLITLNLLLFI
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mRNA from alignment at LSalAtl2s1:3379623..3380188-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003731-699578 ID=EMLSAT00000003731-699578|Name=EMLSAT00000003731|organism=Lepeophtheirus salmonis|type=mRNA|length=566bp|location=Sequence derived from alignment at LSalAtl2s1:3379623..3380188- (Lepeophtheirus salmonis)
ATGTATAAGTAAACATTATAATATTACAATTACTCCATCTAACCTAGAAA
TCTTTTGGTGAAATCCATATACATATAGTATATTTCGGTCTCTAGGAATC
ACCGGGGTGCGAACGTACACACATTCAGTTCAAGAGAATAACTCTCGAAC
TGGGGGGGTCCATCAGCTATGGCGATTCCTTTCTGATTCTTTCATTCTTT
GTAGACTCCGCCTCGACTTCCTTCTCAAGCTGGAAATCACCAAAGAATCC
TATCAGGACAATCTACTTAAAAATATATCTATCCCAGATGGTCGGTAAAA
TCATCATACTAGACTATGTCTTAATCAACAATTTCCTTTGTATATTTCTT
GAATTTACTCCATCATTCTTCAGAAGCCTATTTTCCCCTTTTGGAACTCT
GTCTCTCTCGATCATGCTAAGTCAAGAGTGTTATCTTGTCAACCTTGTTT
GGATCATTGTTCATTGGAAAAACATTAGCCCTGGAGGATACCATGTTTTC
ATTACTCTTACGTTGTGGAGTACGACTTTTTATCTCATAACACTGAATTT
ATTACTTTTTATTTAA
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