EMLSAT00000003781, EMLSAT00000003781-699628 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003781
Unique NameEMLSAT00000003781-699628
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s204supercontigLSalAtl2s204:485099..486306 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003781 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003781EMLSAG00000003781-686547Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016468EMLSAE00000016468-725396Lepeophtheirus salmonisexon
EMLSAE00000016469EMLSAE00000016469-725397Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778072auto778072Lepeophtheirus salmonispolypeptide
EMLSAP00000003781EMLSAP00000003781Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003781

>EMLSAP00000003781 ID=EMLSAP00000003781|Name=EMLSAP00000003781|organism=Lepeophtheirus salmonis|type=polypeptide|length=376bp
MSGEKDKKEGRDFYTLLGLERTATQSEIKQAYRRLAVKYHPDKNPGNEEA
SDKFKEISTAYAILSDPSKKHMYDLKGEDEALKHFPTVNIEEMGTLGRVI
GGLVTQAGVPLPTEITPKVLSLAKYLTNGETNIQGIDIPQVITVEYGKEV
AAKLPRQSAKFFWITVSQSDLNKGVLVLCRSNGNDKFKVIFFDKDGQVSM
IQESRKLKKHSEANILLLPFPHYQLNEQDIFSRMSEDIPSVFMALDLFNK
DTKSLIPGKHLFCVYQDNWLFQGNFTMKCLEGLSQGTEFEQEIRRVEDQM
VTKKKEMEEFQPEYVKVMKKAGEVTEKVKNFTTETNELMAKREKIYNEYI
TKCEDQYGNNQIEKNTSLFDNIPKFW
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mRNA from alignment at LSalAtl2s204:485099..486306-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003781-699628 ID=EMLSAT00000003781-699628|Name=EMLSAT00000003781|organism=Lepeophtheirus salmonis|type=mRNA|length=1208bp|location=Sequence derived from alignment at LSalAtl2s204:485099..486306- (Lepeophtheirus salmonis)
CATTGGAAAGACATGTCGGGAGAAAAAGACAAAAAGGAGGGTAGAGATTT
CTACACCCTCTTGGGACTCGAACGTACCGCAACACAATCAGAAATCAAAC
AAGCTTATCGAAGATTAGCTGTTAAATACCACCCAGATAAAAATCCAGGG
AATGAAGAAGCATCCGACAAATTCAAGGAAATATCCACTGCCTATGCCAT
CCTCTCTGATCCAAGTAAAAAGCACATGTACGACTTAAAGGGAGAGGATG
AGGCACTTAAACATTTTCCAACTGTAAATATAGAAGAAATGGGAACACTT
GGAAGAGTTATTGGGGGTCTCGTGACACAGGCAGGKGTTCCATTACCAAC
TGAAATAACGCCCAAAGTTCTAAGGTAAAGACAATATAGTATAATTAATA
AGGTATATTATTATATGTTTGAATTGTTTCTTTGGTTTTCAGTTTGGCGA
AATATCTCACGAATGGAGAAACAAACATTCAAGGCATTGATATCCCACAA
GTAATAACTGTGGAGTATGGAAAAGAAGTTGCTGCTAAATTACCACGCCA
ATCAGCCAAGTTTTTTTGGATAACAGTGTCTCAGAGTGATTTAAATAAGG
GGGTTCTGGTTTTGTGTCGTAGTAACGGGAATGACAAATTTAAGGTCATA
TTCTTTGACAAAGATGGGCAGGTTTCAATGATTCAAGAGTCAAGAAAGTT
AAAAAAACATAGCGAGGCTAATATTTTACTACTTCCATTTCCTCATTATC
AACTTAATGAGCAGGATATATTTAGCCGTATGTCAGAAGATATCCCATCT
GTCTTTATGGCCTTAGATCTATTTAATAAGGATACTAAAAGCCTCATACC
CGGAAAACATCTTTTTTGTGTTTATCAAGATAATTGGCTATTTCAAGGGA
ATTTTACTATGAAATGTTTGGAGGGTTTGTCTCAAGGAACGGAGTTTGAG
CAAGAGATAAGGCGTGTTGAAGATCAGATGGTAACGAAGAAAAAAGAGAT
GGAAGAGTTCCAGCCTGAGTATGTCAAGGTAATGAAAAAAGCAGGAGAAG
TGACGGAAAAAGTTAAGAATTTCACGACCGAAACTAATGAACTCATGGCA
AAAAGAGAAAAAATATATAATGAATATATTACAAAGTGTGAAGACCAATA
TGGAAATAATCAAATTGAAAAAAATACATCTCTCTTTGATAATATACCCA
AATTTTGG
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