EMLSAT00000003787, EMLSAT00000003787-699634 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003787
Unique NameEMLSAT00000003787-699634
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2051supercontigLSalAtl2s2051:37652..38152 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003787 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003787EMLSAG00000003787-686553Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016483EMLSAE00000016483-725411Lepeophtheirus salmonisexon
EMLSAE00000016484EMLSAE00000016484-725412Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770179auto770179Lepeophtheirus salmonispolypeptide
EMLSAP00000003787EMLSAP00000003787Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003787

>EMLSAP00000003787 ID=EMLSAP00000003787|Name=EMLSAP00000003787|organism=Lepeophtheirus salmonis|type=polypeptide|length=68bp
MGVYKDQKNDLAKTASEIKERGGSPIPVKLNHNNDLEVEQFFERDKNEQK
DQLDLLVNNAYSGVGIIN
back to top

mRNA from alignment at LSalAtl2s2051:37652..38152-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003787-699634 ID=EMLSAT00000003787-699634|Name=EMLSAT00000003787|organism=Lepeophtheirus salmonis|type=mRNA|length=501bp|location=Sequence derived from alignment at LSalAtl2s2051:37652..38152- (Lepeophtheirus salmonis)
ATGGGTGTTTATAAAGGTTAGTAGTAGTAAAGAAAAATTACGTCATTTGT
TTTCTATTAAAGAGTTCATAGTGTACTTTACACCCAAGTTTATACTTTTG
CTTTAAAAACTAAATTAGTTGGATTTCATAGCTCCATCATTCAAGAAAAT
AATACTTACTCATTTTCCTTATAATAATAAATTTAATAGCATTATTGGGA
AATGAACTGAAGGGGAAAGATTGCTATAGTAACAGGGATGTCTTGAAGCA
TTGAAAAAGGATATCACTTCAAATTGGTGGAGCCGGAGCAATCATTTATA
TCACTGGTAGATCAAAAAAATGATTTGGCGAAAACAGCCAGTGAAATCAA
AGAGAGGGGAGGATCTCCAATCCCTGTTAAGTTAAATCACAACAATGACT
TGGAAGTGGAACAATTTTTCGAAAGAGACAAAAATGAACAAAAGGATCAG
TTGGACTTGTTAGTAAACAACGCATATTCCGGAGTTGGGATCATTAATTA
A
back to top
Add to Basket