EMLSAT00000003793, EMLSAT00000003793-699640 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003793
Unique NameEMLSAT00000003793-699640
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s205supercontigLSalAtl2s205:25104..25900 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003793 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003793EMLSAG00000003793-686559Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016507EMLSAE00000016507-725435Lepeophtheirus salmonisexon
EMLSAE00000016508EMLSAE00000016508-725436Lepeophtheirus salmonisexon
EMLSAE00000016509EMLSAE00000016509-725437Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769677auto769677Lepeophtheirus salmonispolypeptide
EMLSAP00000003793EMLSAP00000003793Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003793

>EMLSAP00000003793 ID=EMLSAP00000003793|Name=EMLSAP00000003793|organism=Lepeophtheirus salmonis|type=polypeptide|length=119bp
MLKYSLLLRHYIEASRPTFVEKKVERTKNGSIRMGCVKKLRNDFPTVHRR
VHRIAKKPTKLSCRVRSTLTPENXIVIHAXIHKGKRIVILKEFRSGILLI
CGAFKLNNCPIKRINQRYF
back to top

mRNA from alignment at LSalAtl2s205:25104..25900-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003793-699640 ID=EMLSAT00000003793-699640|Name=EMLSAT00000003793|organism=Lepeophtheirus salmonis|type=mRNA|length=797bp|location=Sequence derived from alignment at LSalAtl2s205:25104..25900- (Lepeophtheirus salmonis)
ATGCTTAAATATTCTCTTCTTTTGCGTCACTACATTGAGGCCAGTAGGCC
CACCTTCGTAGAGAAGAAGGTCGAGCGTACCAAGAATGGAAGTATTCGTA
TGGGTTGTGTCAAGAAGTTGAGGAACGACTTCCCCACTGTGCACAGGTAC
GAATCATTGACTCACTTATTACTCTTTGCTTTACGTAATCCCTTCCTTGG
CGACATGATGAACCAATAATCATATTTTAGGAAAAGCCGTCTGACACACA
AATGAAGCTTTTTAAAGTTCTGATCCCATTTTTTATTCCTGTCATTGCAT
TTTCCTTCATTAATCATTCTTCAATCAATTGTTTAAGTTATCCCTTTTTT
ACAGACGTGTGCATAGAATTGCTAAGAAGCCCACAAAACTCTCTTGCAGG
GTCCGTTCTACCCTCACACCTGAAAATKCCATAGTTATTCATGCCGMTAT
CCACAAAGGAAAGAGAATCGTCATTCTCAAGGAGTTCAGAAGTGGAATCC
TTCTTATTTGCGGTAAGTTTTTTTCTATTATATGGAACTTAACGCGATCT
ATGTAGTGAGACAACTTTGCAATTTCCTTGTATTTGTGCTCAAAGACTTT
TTCGCAAAAGCAAAGTAGTGGCTTTCTAATCGTTCTCGTAACAAATCATT
GTTCAGAATCTTTCGCCGCCGACTTACAAAGCTTATTTCGTTTACTTTAT
AACATCCATCAAATAATTCTTGATTTGTTCTACTCTTTCAGGAGCCTTCA
AGCTTAATAACTGCCCAATTAAAAGGATTAACCAACGCTACTTCTAG
back to top
Add to Basket