EMLSAT00000003816, EMLSAT00000003816-699663 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003816
Unique NameEMLSAT00000003816-699663
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s206supercontigLSalAtl2s206:593132..594481 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003816 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003816EMLSAG00000003816-686582Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016593EMLSAE00000016593-725521Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778790auto778790Lepeophtheirus salmonispolypeptide
EMLSAP00000003816EMLSAP00000003816Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003816

>EMLSAP00000003816 ID=EMLSAP00000003816|Name=EMLSAP00000003816|organism=Lepeophtheirus salmonis|type=polypeptide|length=449bp
MNFTFILIHNLTEECTHLFGSPLPMGLMTIIQIFYGLVCMVGLCGNTLVI
YVVLRYSKMQTVTNMYILNLALADECFLVGIPFLIVTSYLGDWPFGMEMC
KIYLTTTSINQFTSSIFLTVMSADRYIAVCHPISSPKYRTPVIARCVSLX
AWXASAMLMVPVFMYAATITKPTGGQSCNIFWPFEESEDLEGEEGEYFSQ
GGPRSYLNGQTAFTFYSFVLGFAIPLILILIFYVLVIVKLKTVGPKNKSK
VKKRSHRKVTRLVLTVITVYILCWLPYWITQLALIFTPPGHNQDNVVVAV
MLLAGCLSYSNSAMNPVLYAFLSENFKKSFMKACTCVKGREVNAALHVDN
SMFPRRRNHRKTGDKKNKDSTGRSNNKQSMRLKDSNIASAKNGGLLLSGG
DQNSHGKEAHELHEISVHGKQNTSSAXVTMTTSVVEQSQQNPESIAESS
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mRNA from alignment at LSalAtl2s206:593132..594481+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003816-699663 ID=EMLSAT00000003816-699663|Name=EMLSAT00000003816|organism=Lepeophtheirus salmonis|type=mRNA|length=1350bp|location=Sequence derived from alignment at LSalAtl2s206:593132..594481+ (Lepeophtheirus salmonis)
ATGAACTTCACCTTTATTCTAATACATAATTTAACAGAGGAATGCACTCA
CTTATTCGGTTCTCCCCTTCCCATGGGTCTCATGACCATTATTCAAATAT
TTTATGGCCTCGTTTGCATGGTAGGACTCTGTGGAAACACCCTCGTCATC
TATGTCGTTCTCCGTTACTCTAAAATGCAAACAGTGACAAATATGTATAT
CCTCAATTTAGCATTGGCTGATGAGTGCTTCCTCGTGGGGATCCCTTTTC
TCATTGTGACATCCTATCTGGGAGATTGGCCCTTCGGGATGGAGATGTGC
AAAATATATTTGACAACCACGTCCATCAATCAGTTTACAAGCTCCATATT
CCTCACGGTCATGTCTGCTGATCGCTATATCGCCGTTTGTCATCCTATTT
CGAGTCCAAAGTATAGAACGCCGGTTATAGCTCGTTGCGTTAGTCTTNCA
GCCTGGKCTGCCTCTGCCATGCTCATGGTTCCCGTGTTTATGTATGCTGC
GACCATTACAAAGCCGACGGGAGGGCAAAGTTGTAATATATTCTGGCCCT
TTGAAGAGAGTGAGGATTTGGAGGGAGAAGAGGGAGAGTATTTTTCGCAA
GGCGGCCCAAGAAGTTATCTCAATGGACAGACGGCCTTTACTTTCTATAG
CTTTGTTTTGGGATTTGCAATACCCCTCATTCTGATACTCATTTTCTATG
TCCTCGTCATCGTCAAACTAAAAACTGTTGGACCTAAAAATAAATCCAAA
GTGAAAAAGAGGAGCCATCGTAAGGTGACACGCCTCGTTTTGACCGTCAT
AACGGTCTATATCCTCTGCTGGTTACCATATTGGATCACTCAACTTGCCC
TTATATTTACTCCTCCTGGGCATAACCAGGACAATGTTGTGGTTGCCGTC
ATGCTTCTAGCAGGCTGTTTGAGCTACTCAAACTCAGCAATGAATCCTGT
CCTCTACGCATTTCTTTCTGAGAACTTTAAAAAGAGTTTCATGAAGGCCT
GCACTTGTGTTAAGGGACGAGAGGTCAATGCTGCTCTTCATGTGGATAAC
TCTATGTTTCCCAGACGAAGGAATCACCGCAAAACGGGAGACAAGAAAAA
TAAGGACTCCACTGGGCGAAGCAACAATAAACAGAGTATGAGACTCAAAG
ATTCCAACATTGCAAGTGCCAAAAATGGGGGACTCCTTCTCTCTGGAGGG
GATCAAAATAGTCATGGAAAGGAGGCTCATGAACTTCATGAAATATCCGT
CCATGGGAAACAAAACACATCTTCGGCAKAAGTCACTATGACCACCTCTG
TGGTAGAGCAGAGTCAACAAAATCCCGAGAGTATTGCCGAGTCCTCATAA
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