EMLSAT00000003823, EMLSAT00000003823-699670 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003823
Unique NameEMLSAT00000003823-699670
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s206supercontigLSalAtl2s206:668032..669012 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003823 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003823EMLSAG00000003823-686589Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016614EMLSAE00000016614-725542Lepeophtheirus salmonisexon
EMLSAE00000016615EMLSAE00000016615-725543Lepeophtheirus salmonisexon
EMLSAE00000016616EMLSAE00000016616-725544Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779232auto779232Lepeophtheirus salmonispolypeptide
EMLSAP00000003823EMLSAP00000003823Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003823

>EMLSAP00000003823 ID=EMLSAP00000003823|Name=EMLSAP00000003823|organism=Lepeophtheirus salmonis|type=polypeptide|length=283bp
MSRGMGCRPKVWNPLLKRGFINASNRPTSSKGLLTEEDEILLEKSHKQLQ
ELEEYSKKISKSIKKHHDRLICLQKADLKVSSYLLNSPAFEENKELHQMA
EIYQKTAYQLGKLTEEFTNMTQKVFIDPMKTFNASFQDIGLFIKKRDLLL
SECLKNKSKKEKLEATTIAEKVKLEQAKIAYHISHDEFQKTNDELLKELI
SFYEIRHKYIDPCVEAYCHAQADYYLESTRLFTILTYXLDSSGYEATKSD
INFQKDLDKLLEEFKSVDIVDGANLKIKKIQKK
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mRNA from alignment at LSalAtl2s206:668032..669012-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003823-699670 ID=EMLSAT00000003823-699670|Name=EMLSAT00000003823|organism=Lepeophtheirus salmonis|type=mRNA|length=981bp|location=Sequence derived from alignment at LSalAtl2s206:668032..669012- (Lepeophtheirus salmonis)
ATGTCAAGAGGTATGGGTTGTAGACCCAAGGTCTGGAACCCCTTACTGAA
AAGGGGATTCATCAACGCATCAAATCGTCCAACCTCTTCCAAGGGACTTT
TAACCGAAGAAGATGAGATTCTCCTTGAAAAATCTCATAAACAGTTACAA
GAGCTCGAAGAGTACTCCAAGAAAATTTCAAAGAGCATAAAAAAGTAATC
CACATCAGTCATCATCAGTTACAATAAGTAATTACCTCTCTTTTTTAGGC
ATCATGATCGTCTAATTTGTCTTCAAAAGGCTGATTTGAAGGTATCATCG
TATCTACTAAATTCTCCAGCCTTTGAAGAAAATAAAGAGTTACATCAGAT
GGCAGAGATATATCAAAAAACTGCATACCAATTGGGGAAGCTAACAGAAG
AATTCACTAACATGACGCAAAAAGTTTTCATAGATCCCATGAAAACATTT
AATGCTTCCTTTCAAGACATTGGACTCTTCATTAAAAAAAGGGATTTGCT
TCTCAGGTACTCTGTCTTTCACATATCAAATTTTTAGGTACATTTAACTA
TGTTATATTTTAACTGCAAACATATTTTCAGTGAATGTCTAAAAAACAAA
AGCAAAAAAGAGAAATTAGAGGCAACAACAATTGCTGAAAAAGTAAAGTT
GGAGCAGGCCAAGATTGCATATCACATATCCCATGATGAATTCCAAAAAA
CCAATGACGAACTCCTTAAAGAATTGATATCTTTTTATGAGATTCGGCAC
AAATATATTGATCCTTGTGTTGAGGCATACTGCCACGCACAAGCAGACTA
TTATCTTGAATCCACTCGTTTGTTTACTATTCTGACTTATKCCCTTGACT
CATCAGGATATGAAGCAACCAAGAGCGATATTAACTTTCAAAAAGATCTG
GACAAGCTTCTGGAAGAATTCAAATCCGTTGATATAGTGGATGGTGCTAA
TTTGAAAATCAAGAAGATTCAGAAAAAATAA
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