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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s208 | supercontig | LSalAtl2s208:199193..204733 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003841 >EMLSAP00000003841 ID=EMLSAP00000003841|Name=EMLSAP00000003841|organism=Lepeophtheirus salmonis|type=polypeptide|length=852bp
MIVRKNNSASLFYFSSLLLLLLVDLSSGDKNPLVIQGISVQQEEDLSQLF
AEARSFPGENEDQVAIESRIVESTADSRDGSGGHHHHHGGGGHNHHGSGN
SNNDSPTSFDSFSAPNAPAPQVTYSNEPPPPPPAGAISQGPNIIIQAAPA
PDNVDSYGSPQAPIVTEGDSYGSPQAPIVSGGGSDSYGSPQAPIVNNGGG
DSYGSPSGQVISGPPPPAPINQRPIPVPLPVPVQPGSIVLPGGPGIFGPP
KPQYKPRPQPPKRPSYRPPPPHKKRPHPPPKPQYKPQPRPHPHPKPQHKP
HYKPRPKPNFNKGPKPSYKQPKRPSYNPPPQYKPAPQPKPQYKPAPQPPK
PVYKPAPPNYNNAVAPPAIVTNEVESWPKAQPEMPKIVSLDVTCEKNLMK
VHIEFDKPFYGIIFSKGHYSDVNCVHLPAGLGRTKANFDVSIHSCGTTGN
TENGLYGYGADSGSGTYFENTIVVQYDPQVQEVWDQARKLRCTWHDQYEK
SVTFRPFAVDMLDVVRADFAGDNVGCWMQIQVGKGPWASEVSGLVKIGQT
MTMVLAIKDDEQKFDMMVRNCMAHDGKRAPIQLVDQKGCVTRPKLMSRFT
KIKNFGASASVLSYAHFQAFKFPDSMEVHFQCTIQICRYQCPDQCGNDVI
QAPAGENNDQYGSPVAPVQNVYSSSSSAGSSSTLDTYTINKRSKRATEDL
TEEEESTENEEAAEEDIESKSSSXTTTTIEEGEEIVEIVNKDDEVEIDLS
DIGVQKVIQVVSTNDLTFAIKENEDEAEQEYPPVTQSLTDEQGYICMSTP
AFAATLVILLAILVISCLLSAFLCLRHRSYYGESSLIAAFSNPVFAHKKG
HF back to topmRNA from alignment at LSalAtl2s208:199193..204733+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003841-699688 ID=EMLSAT00000003841-699688|Name=EMLSAT00000003841|organism=Lepeophtheirus salmonis|type=mRNA|length=5541bp|location=Sequence derived from alignment at LSalAtl2s208:199193..204733+ (Lepeophtheirus salmonis)
AAAATAAGTAATTTTTTTTTATATTAAAAAAAAATTATTTTTCGGGAAGG
TGTGTTATATATATAATATTATATTCAATATATTAATATATGGATATTTA
GTGTATATGGATCCATCAACGAATACATCTTAAAACTGTGTCTTCATCTT
CTAAATAAAACTTCCCGATTTGCATTACATTTGCTTCTTTTTTTGAGCCG
TTCTTATCATTCAGGTAGTTGAGCCACAAACAAAAATCCCAAACAACATC
GAACCACAAGTTTCTTTTATTTTTTGTTTCAGTCGGCCATTTCTAACTAT
TACAAAGCTAAAATTAGTTACCTCAACGAAAACTCTAAAAAAAAATTAAT
TAAAATGATTGTTCGGAAAAATAATAGCGCATCATTATTTTACTTCTCCT
CTCTTCTCCTTTTATTATTGGTAAGTACAGAATTAAAACCTATTTTTATG
TATTTTTTATAGTCATAAATTATTTTTAATACATTGAGTGAAAGTCCAGT
TCCTGACGCCTAAAAAAAAGGACACATAGTTTTGACCCCCAAGGACAGGG
CGGTGGTCCTTTTTATATATTTAACGGTTTTTCTTACTCCATAATTTATT
ATTTTTCTCTTCCACTCCTCGCTTCTTCTTCTTTCCTTAGTTATAAACTT
ATAATAATTGACTACCCTAAAGAGAAGAAGAGGTGGCCTGGCATCTGGAC
GTTATAAGAATATAATGTGTACATATATGAAAAAAGTGAAAGTTATAACT
CGTATCTTATAAATATATATATAAATATCATTTTTTTTCAGCAAGTGAAA
CTTGCTGTGGATTCCCATGAAATAGTTTAAATTCTGAAATTTTTTCAAGA
TCAAATCATTGTCAATTTAATTTTTTTGGACCATTTCAGCAATTCCTATT
TTTGATACTTATATTTTTTTAAATAGTTATTTTCCAGGTTTTTTATGAAT
ACAAAAAATATATAGTTATTTGCAGATTTTGTTGCTATCTATAAGTATTT
TATGCAAATAAATTCCTGACAATATTTATGACATTTTAAGCAGATGTTTT
AGAAATATATATATTTTTTTCCACTGTGTTTTGCTTAGAATGAGTTGTTT
AGCAGATTTTACAATAAATTACTGCAATTTTTTTATACATGTTGGTTACA
ACAGGTATTTCTTATTTTTTTTCTAATTTCGGGTACCACCGGATCCGCGT
AAAATCTTAATATATATTATTAATATATGTGTACATATATATTTATTTTG
CCTTCCTGTTACGCAATTCTGAATTCGTTTCTTTCTTTCTCTTTCTTTTT
CTTCTTCTTAAAAAATGAGAGGAAAATGAATGGTTAAGACGTCTTAAAAC
CACCAGTTCTATTAGTGTATATGTACATAAATAGTACCCTGCGTTACTTG
TATATATTTAACTATAAGAAGAACCTACCGAATCCRCCTCCTTAYGGGMT
WCTTTCWRTTTTTTTTTRTTGAACTTCTCRCCTGAAWGAYMGSGGGSSCT
KAAAWYGGYGGGGGGNGGGGTAAATCCTTGAAATTTTTTTTTTTTTTTTT
GAAAAATGTTGATTGATATTATTAAGAAATCCTCTTTTTTTCGAATGAAT
CAAGCCTCTTCGGTTGAACGCCCTTTACGAATAATCATAATTATTATAAG
AAAAAAAGGGTGAGCCCCCCCCCCCTCKCTTCKTTTTTTTTTTGGCATTM
TCCGGTACCTTTCATAAATATTTATAGGCTTTTTGATAGGAAATCTCATA
ACATTGTGTTCAATTGGATTTTTTGAGTGTTGATTTATGAAGTCAATTAT
CTACTATTTTAGGCCTGCCTGCCCTGCAAAATAACAATATATGAAATATG
TATACATATAATCAATTGCCCCAAGCTGTTCACTTTCTTCTTCATCTGCT
TGTACACAATCTTCTTCGTTTTTCATGTCATGGTGATACACCTCTTCAAC
TCCTTTACATTACTGTTTTATTTCTTTACTGTACTATTCACGTAACCCAC
TCATGCCGGTTTTTTATCTTTTTCCATTCCTCTTAGGTGGACCTCAGCAG
TGGAGATAAGAATCCCTTGGTCATTCAAGGGATCTCTGTACAACAAGAAG
AGGATCTATCTCAACTATTTGCAGAGGCTCGTTCCTTCCCAGGTGAAAAT
GAGGATCAAGTTGCTATAGAATCGAGGATTGTAGAGTCTACGGCAGATTC
CCGTGATGGAAGTGGTGGTCATCATCATCACCACGGGGGTGGTGGTCACA
ATCATCACGGATCTGGGAACTCCAATAACGACTCTCCAACATCTTTTGAC
TCATTTTCTGCTCCAAATGCACCTGCACCACAAGTGACCTACTCCAATGA
GCCTCCTCCACCTCCTCCAGCAGGAGCCATATCTCAAGGACCCAACATCA
TCATTCAAGCCGCTCCTGCTCCTGATAATGTAGATTCTTACGGATCACCT
CAAGCTCCTATTGTCACAGAAGGAGATTCTTATGGATCACCACAAGCCCC
TATCGTTTCTGGAGGAGGAAGTGACTCCTATGGAAGTCCTCAAGCACCAA
TTGTGAACAATGGTGGAGGAGACTCATATGGTTCCCCATCTGGACAAGTG
ATCTCTGGACCACCACCACCAGCACCCATCAATCAAAGACCCATCCCCGT
GCCACTCCCAGTTCCTGTTCAACCCGGATCCATCGTACTCCCAGGAGGAC
CTGGAATTTTTGGACCACCAAAGCCTCAATACAAACCACGACCACAACCA
CCAAAACGTCCCTCCTATAGACCTCCTCCACCTCACAAGAAGAGACCTCA
TCCACCACCAAAGCCACAATACAAACCTCAGCCAAGACCTCATCCTCATC
CCAAGCCTCAACATAAGCCACACTACAAGCCAAGACCAAAACCTAATTTC
AACAAGGGACCCAAGCCTTCCTACAAACAACCCAAAAGACCCTCATACAA
TCCTCCACCTCAATACAAGCCTGCTCCTCAACCAAAGCCTCAATATAAGC
CTGCTCCTCAACCACCAAAGCCCGTCTACAAACCAGCRCCKCCCAACTAC
AACAATGCAGTTGCRCCRCCTGCCATTGTTACTAATGAAGTGGAATCATG
GCCCAAAGCTCAACCTGAAATGCCCAAAATTGTCTCTCTTGATGTTACTT
GCGAAAAGAATTTGATGAAGGTTCACATTGAATTTGATAAGCCATTTTAT
GGTATCATCTTCTCCAAGGGACATTACTCTGACGTTAACTGTGTGCATCT
CCCAGCTGGACTTGGAAGGACAAAGGCCAACTTTGATGTGAGTATTCACT
CTTGTGGAACTACAGGAAATACTGAAAATGGACTTTATGGTTATGGAGCC
GACTCAGGATCGGGTACTTACTTTGAGAACACTATCGTTGTTCAATACGA
TCCTCAAGTACAAGAAGTCTGGGATCAAGCACGCAAACTTAGATGCACAT
GGCACGATCAATATGAAAAATCTGTCACTTTCAGACCTTTTGCTGTTGAT
ATGTTGGATGTTGTACGTGCAGACTTTGCCGGAGACAATGTTGGTTGCTG
GATGCAAATTCAGGTAGGAAAGGGTCCATGGGCATCTGAAGTATCTGGAT
TGGTAAAGATTGGACAGACCATGACCATGGTTTTAGCTATCAAGGATGAT
GAACAAAAGTTTGACATGATGGTAAGGAATTGTATGGCTCATGATGGAAA
ACGTGCTCCCATTCAGTTGGTAGACCAAAAGGGCTGCGTTACTCGACCAA
AACTCATGTCTAGATTCACAAAAATTAAGAACTTTGGAGCCTCTGCCTCT
GTTTTGAGCTACGCACACTTCCAAGCCTTTAAATTCCCTGACTCGATGGA
GGTTCACTTCCAATGTACCATTCAGATCTGCAGATACCAATGCCCAGACC
AATGTGGCAACGATGTCATCCAAGCACCAGCTGGTGAAAACAATGACCAA
TACGGATCCCCAGTTGCTCCTGTTCAAAACGTATACTCTTCTTCCTCCTC
GGCCGGTTCATCATCTACCTTGGACACATATACCATCAATAAGAGAAGCA
AGCGTGCCACTGAAGACCTCACCGAAGAAGAAGAATCTACAGAAAATGAA
GAAGCTGCGGAAGAAGATATCGAGTCTAAGAGCAGCAGTKCCACCACTAC
CACCATTGAAGAAGGAGAAGAAATCGTGGAGATTGTAAACAAGGATGACG
AAGTGGAAATCGATTTGTCAGACATTGGAGTTCAAAAGGTCATTCAAGTC
GTTTCCACCAATGACTTAACCTTTGCAATCAAAGAAAATGAAGATGAGGC
AGAGCAGGAGTACCCTCCTGTAACACAGTCCCTTACGGACGAACAAGGAT
ACATTTGTATGTCAACTCCTGCCTTTGCAGCTACACTTGTCATTCTTTTG
GCCATTTTAGTTATTTCTTGTTTATTAAGTGCATTCTTATGCCTGCGTCA
TCGATCTTACTATGGAGAATCCTCACTCATAGCAGCTTTTTCAAATCCTG
TATTCGCACATAAAAAGGGACATTTTTAGGAAAATAATATTTTTTTTTTA
AATTTTTTTTTTCCCGTCAAAAAAATTTCTTAATTAAAAAAGAAATGTCT
TATATAGAATAGGCAATAGTAATTCACAAAAAATAAAATCGCATTCTACC
AATTTTTTATATAACATTTTCTTTTGTTTTTTAAAAAGAAATGTTACATG
TTCCGTTTGGATAAATAATTAAACGTAATATTTTCTCCTGTATGTTATTA
TCTGCTGCTACTTTTACTTACTTACTTACTACTACTACTACTACTACTAA
CTTTTTTCAAACAATGGAATTGAGTATACAAGCTAGTCATTGTATATGCT
TGTAAAAAAATGTGGCTTTTGCAGAGAGGGCATCCAAGCCCTATATTATT
TGTTTTTATCATGCCAACAGCAAGAACAATACTACGCGTGCAAAGTTTAA
ATAATATAAAAAAATAAAAAACTGTGATATCTTTTTCATAACACGCAAAA
AAAAAAGAATTAAAAAAAATATTATTATTTGAAAAAAGTCCCAAATAGTT
CCTTTTTAAATATTTTTTTCTCTACCTAGAAAAAATCCATTGGATATTTT
CTTTCTCCTTAAAAAAAATATATTACAATTTTCATTTTCATCAAATTTAC
ACCCTTAAACATTTTTTTCTGACTTTTTAATTATATAATATAATCAATAA
ATAATGTAATGTATAGCTTATAATGAAAATTTAGATAAGATAAAATTGTA
ATAGTAATGAATAATAATATAATCACAAAAAAATTAATAATTATGAATAC
AAGGTACCTCGGCACCTATCTGCTCAATTGGTGTAATTTTTTTGTCAATC
CCTCTTTGTTATAATTATATCAAATTTTTTTCCCTTAAATTTGTAAATAA
ATATCATAAAGAAACAAAAAAAATTCAAAAAAGCAAAAATATTTGTTTCT
TTTTTTTGTGAACTTACTTTTTTATTATTATGTTTATATGATGCAATAAT
TATTTTTCCATTTGACATTACTATTAATAATAATAATTAAG back to top
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