EMLSAT00000003908, EMLSAT00000003908-699755 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003908
Unique NameEMLSAT00000003908-699755
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s211supercontigLSalAtl2s211:1034890..1035408 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003908 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003908EMLSAG00000003908-686674Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016962EMLSAE00000016962-725890Lepeophtheirus salmonisexon
EMLSAE00000016963EMLSAE00000016963-725891Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780293auto780293Lepeophtheirus salmonispolypeptide
EMLSAP00000003908EMLSAP00000003908Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003908

>EMLSAP00000003908 ID=EMLSAP00000003908|Name=EMLSAP00000003908|organism=Lepeophtheirus salmonis|type=polypeptide|length=151bp
MTPNYGKIYRIWLTVEIVLLLLIGIMLSVLFGIYYSKQLPLVITIVSVMQ
LLITYGSLIGIRYMAIKTSLRCEIKWVYAELTCTGFTLIALVCVVILSIG
LCICGQVYQGIIIGISSLIFLKVVAIKFFIGHQVASILDEKRCHGILKNA
V
back to top

mRNA from alignment at LSalAtl2s211:1034890..1035408-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003908-699755 ID=EMLSAT00000003908-699755|Name=EMLSAT00000003908|organism=Lepeophtheirus salmonis|type=mRNA|length=519bp|location=Sequence derived from alignment at LSalAtl2s211:1034890..1035408- (Lepeophtheirus salmonis)
ATGACTCCAAATTACGGAAAAATCTACAGAATATGGTTAACGGTGGAAAT
TGTGTTACTTCTTTTAATTGGAATCATGTTATCTGTACTCTTTGGGATTT
ATTACTCGAAACAGCTTCCTCTTGTAATAACAATTGTTTCAGTTATGCAA
TTACTAATTACCTACGGATCCCTCATTGGAATCAGGTACATGGCCATTAA
AACATCCCTTCGGTGCGAAATTAAATGGGTCTATGCAGAGCTGACTTGTA
CTGGATTTACATTAATTGCTCTGGTATGCGTTGTTATCCTCTCAATTGGA
CTTTGTATTTGTGGTCAAGTATATCAAGGGATCATCATTGGGATTTCAAG
TTTAATATTCTTAAGTATGTTCGTTCCATATCAATATTTATATAATAACA
CAAATATTTATCTTTTTCTAATTATAGAGGTCGTTGCAATTAAGTTTTTT
ATTGGGCATCAAGTAGCATCTATACTTGATGAAAAGAGATGTCATGGTAT
ATTAAAAAACGCAGTTTAA
back to top
Add to Basket