EMLSAT00000003917, EMLSAT00000003917-699764 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003917
Unique NameEMLSAT00000003917-699764
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s211supercontigLSalAtl2s211:1120659..1122189 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003917 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003917EMLSAG00000003917-686683Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016992EMLSAE00000016992-725920Lepeophtheirus salmonisexon
EMLSAE00000016993EMLSAE00000016993-725921Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780442auto780442Lepeophtheirus salmonispolypeptide
EMLSAP00000003917EMLSAP00000003917Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003917

>EMLSAP00000003917 ID=EMLSAP00000003917|Name=EMLSAP00000003917|organism=Lepeophtheirus salmonis|type=polypeptide|length=440bp
MFHSGGTPTPSTDNNVSPTPPASLPGSNSCLGPKHHHQISPPPPPAFVPG
SYLSGYGSYYXHHHHAHSHHHHGAQEAHQSTTTPSSTGTGSALGSLYSDT
NIHSVPPSTASHHQLHPSQWYSSSHHFANPFYPDWSSPHPSSFLSDTSES
QPYSIHHPSASTHGSSSYFKSSPYAFSANKAVKGDEESILKSTEDEDEED
EKDDILLEESHSLTEVQESQLQHHHISGEAPLTKGKGLGPFDWISNSSKR
SLKSSSSIIGAAHGGGGNGKEGSSRTRTKDKYRVVYSDHQRLELEKEFHX
SRYITIRRKAELATGLGLTERQVKIWFQNRRAKERKQLKKRDEIVGGKET
PIGGSNNRGSHSGLSSSNNGPVPISTHPLPSGHHIHPLESGLHHSMAFNP
XAAAVMLSHRHHHPYTGSSGHHGTPRDVLSXLATSPPSSS
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mRNA from alignment at LSalAtl2s211:1120659..1122189-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003917-699764 ID=EMLSAT00000003917-699764|Name=EMLSAT00000003917|organism=Lepeophtheirus salmonis|type=mRNA|length=1531bp|location=Sequence derived from alignment at LSalAtl2s211:1120659..1122189- (Lepeophtheirus salmonis)
ATGTTTCATTCAGGAGGAACTCCAACNCCCAGCACGGACAACAACGTCTC
TCCAACMCCYCCAGCCTCTCTACCAGGGAGTAACTCATGTCTAGGGCCTA
AACATCACCATCAAATCAGTCCACCACCGCCGCCTGCTTTTGTCCCAGGC
TCCTATCTCTCAGGATATGGCTCTTACTACMCCCATCACCATCACGCACA
CTCCCATCATCACCATGGTGCCCAAGAGGCCCACCAATCTACCACGACGC
CAAGTAGTACCGGCACTGGAAGTGCACTRGGGAGCCTCTACTCCGATACG
AATATCCATTCCGTTCCCCCTAGCACTGCCTCACATCATCAATTACACCC
GTCCCAATGGTACAGCTCCTCACATCATTTCGCAAACCCCTTCTACCCGG
ATTGGAGCTCCCCACATCCAAGCTCTTTCCTCTCAGATACTTCTGAATCT
CAGCCCTACAGCATTCATCACCCCTCTGCATCTACCCACGGATCCTCCTC
TTATTTCAAGTCCAGTCCTTATGCATTCTCGGCTAATAAGGCGGTGAAGG
GAGATGAAGAATCCATCCTTAAAAGTACGGAAGATGAGGACGAGGAAGAT
GAAAAGGATGATATCCTCTTGGAAGAATCTCATTCCCTTACGGAAGTGCA
AGAATCTCAACTCCAACACCATCATATATCGGGTGAGGCGCCTTTAACCA
AAGGAAAAGGACTAGGACCATTTGACTGGATCAGCAATAGCTCCAAAAGA
TCCCTCAAGTCCAGCTCCTCCATTATTGGCGCGGCCCACGGGGGAGGAGG
CAACGGAAAAGAAGGTAATATTCTTAATTATGGAGTCCTTTATGCACTCT
GAGTGATTATTAGGTCTATATTACTATTATGATTGTTACGACTTTTATCA
CAGCCATATAAAAATAAAGAAAATGGCCGTATCATAAAGAAATGCGTATC
ATTCAATGGATGCTACGCATATTTATATTGATTTGAAATACAACATAGTC
CTCAACTTGTTCCTCATTCCAGGCTCAAGTCGGACACGAACAAAGGATAA
ATATCGCGTCGTCTACTCGGATCACCAGCGACTCGAGCTTGAAAAAGAGT
TTCACTMCAGCCGCTACATCACCATTCGTCGTAAAGCAGAACTAGCTACA
GGTCTGGGTCTCACAGAGAGACAAGTCAAGATTTGGTTTCAGAATCGTCG
AGCCAAAGAGCGGAAGCAGTTGAAGAAACGGGATGAAATCGTGGGTGGAA
AGGAGACTCCAATCGGGGGGAGTAATAACAGGGGAAGTCATTCGGGACTG
AGTAGTAGTAACAACGGACCTGTTCCAATCTCTACACATCCTCTACCTTC
TGGCCACCACATCCATCCTCTTGAGTCCGGGCTCCATCATTCCATGGCGT
TCAAYCCASCAGCCGCAGCGGTGATGCTCTCACATCGACATCATCATCCC
TATACAGGATCATCAGGGCATCATGGCACACCTAGGGATGTTCTATCAYC
CCTGGCCACTTCGCCACCCTCATCATCCTAG
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