EMLSAT00000003920, EMLSAT00000003920-699767 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003920
Unique NameEMLSAT00000003920-699767
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s211supercontigLSalAtl2s211:1239582..1241233 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003920 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003920EMLSAG00000003920-686686Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000016998EMLSAE00000016998-725926Lepeophtheirus salmonisexon
EMLSAE00000016999EMLSAE00000016999-725927Lepeophtheirus salmonisexon
EMLSAE00000017000EMLSAE00000017000-725928Lepeophtheirus salmonisexon
EMLSAE00000017001EMLSAE00000017001-725929Lepeophtheirus salmonisexon
EMLSAE00000017002EMLSAE00000017002-725930Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780553auto780553Lepeophtheirus salmonispolypeptide
EMLSAP00000003920EMLSAP00000003920Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003920

>EMLSAP00000003920 ID=EMLSAP00000003920|Name=EMLSAP00000003920|organism=Lepeophtheirus salmonis|type=polypeptide|length=215bp
MSGNAGGGDSDPPPNFQDMIHSPSPTTTSQHRAIIINPLETNSISLMDNS
DRSVTAAHPNSSELECGDTVSPPPSYHDIPGTVPAHQGVSRGPPPSYEDA
VDPNVGGSFSVFKYLIGVMARVWCQDTDNHCRKKARHAQSLISFFLCGWF
IGGCIWVYTIYWPNFEPQFEGDTEYCHQAVYVFTYWIITTSYIFLGIFTS
CICCSSIASVILNRA
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mRNA from alignment at LSalAtl2s211:1239582..1241233+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003920-699767 ID=EMLSAT00000003920-699767|Name=EMLSAT00000003920|organism=Lepeophtheirus salmonis|type=mRNA|length=1652bp|location=Sequence derived from alignment at LSalAtl2s211:1239582..1241233+ (Lepeophtheirus salmonis)
TCAAGACGTACATATATTCTACGAGTGATCCTTTGAATCAATTTGACATT AATTATTTAGTAAGTTTACAATAGAAATCAAACTGCTAGTATAAAGTGTG AGTGTACGTAGTTATTGTCACGGATTTACTTCTCAATCAAATGAGTGGAA ATGCCGGGGGAGGGGATTCGGATCCGCCTCCGAATTTCCAAGATATGATT CACTCTCCAAGTCCGACAACCACCTCCCAACACAGAGCCATTATTATCAA TCCCTTAGAGACCAATTCCATTAGTTTGATGGACAATAGTGATAGATCTG TCACGGCTGCACATCCCAACAGTTCGGAGTTGGAGTGTGGAGACACGGTG TCCCCTCCTCCATCATATCACGATATACCCGGAACTGTACCGGCTCATCA AGGAGTTTCGCGTGGGCCACCCCCTTCCTATGAAGACGCCGTTGATCCCA ATGGTACTAATAACCCCCTTCTCATGTACAAATTAACATGATCACTTATA TTTCTAGCGGAGCCCCCTTCCTACGACTCTCTCTTTGGGAGAATACGTGA CACACACAAGGCATCAAGAAATTTCTTCGATTTCCTCATCAAGTTTATTA TCTTATTGATGGGCACGATAGGCTGTACCATCGTCTGCTCTGTCACTGTC ATCCTTCCAATCTGTATGATTGTCATTGGCTCCKTGTATTTGCATCAATG TCCCGCTGAGCCATACATCCCACTCTTTCTCGTAGTGGGAGGTTCTTTTT CTGTGTTTAAGTACCTCATTGGAGTTATGGCACGGGTTTGGTGTCAGGAT ACCGATAACCATTGCCGTAAAAAAGCTAGACATGCACAGTCGTTAATCTC GTTTTTCTTATGTGGTTGGTTCATAGGAGGTAGGACCAAACTCTTACATA AACACTCCATAAAATAAACTTCATTTTCTTTTAGGTTGTATCTGGGTTTA TACGATTTATTGGCCCAACTTTGAGCCTCAATTTGAGGGTGACACAGAAT ATTGTCATCAGGCTGTTTATGTTTTCACCTACTGGATCATTACTACTTCT TATATATTTTTAGGTAGTTTATCATCATTTGCTTTACCTTAGAGATTAAT TAATGATTGTATTGATTTCAGGCATATTTACTTCTTGCATTTGCTGCTCC AGTATTGCTTCTGTTATTTTAAATCGAGCTTGAAGAAGAAGGAATCTATC TACTTATTATATATTATAACGAAACAAGAACGAAGATTTTTTTATTTATT ATAAAAAACGACTCATCTRGCTCAAATCGTAGGACGCATTGAGCTCAAAA AGATATTACGTGCCTTTTCTATAAATGAATTATATTTATGCATACTTAAT TAATCGTTGTTACTTCATCGTTTGCTTTTAACCCCAGTTTTTCCTGTCAA TGTTTTTTTCCTATGATTATAAAATAATATTTCAATTCATTTTTTTAATG AAAAAGAAAGAGACAGACAATTTATGGCACGAAAATACGGTTTCCCTGAT ATCTCTTTAATACTTTTAAATCCAATTCTCTTTCGATAGTGCTCTTATTT TTTTAAATCCATATTTATACAATTTTTTTTTTTTTTGGTATTTCTAGTCA TTTCGCTTATGTTTTTTAAATATATTACTAAATATTATATTATATTTTAT AT
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