EMLSAT00000003922, EMLSAT00000003922-699769 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003922
Unique NameEMLSAT00000003922-699769
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s211supercontigLSalAtl2s211:1250390..1251916 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003922 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003922EMLSAG00000003922-686688Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000017007EMLSAE00000017007-725935Lepeophtheirus salmonisexon
EMLSAE00000017008EMLSAE00000017008-725936Lepeophtheirus salmonisexon
EMLSAE00000017009EMLSAE00000017009-725937Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780566auto780566Lepeophtheirus salmonispolypeptide
EMLSAP00000003922EMLSAP00000003922Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003922

>EMLSAP00000003922 ID=EMLSAP00000003922|Name=EMLSAP00000003922|organism=Lepeophtheirus salmonis|type=polypeptide|length=465bp
MRSGAMDRARQTVDGAIDRIKAXIQFQREKSNSMCRLRTAYNWLEEKEKR
VTDFDEKGSFLFRAHTLTVLVCLIACLVYVALFEDPVEDTEFNSRRGLLA
AACFWVALGLTIMPDGPFLRPHPVFWRFAFSVSIAYELILIFILFQTPSD
ARKFLKFLDEDLGEPIPEKDYGGNCYIYDPNRPDNPYHNIREKVDVFIFA
HFFGYWCKTLIFRDWWLTTVISVMFEFLEYSLEHQLPNFSECWWDHWILD
VFICNGGGTVLGLFMLKYLSMKEYNWRGLWDIPTYRGKIKRIIAQFSPHG
WIEFTWNPLSSLERWLAVLGIIAMFLVTELNTFYLKFVLWFPPEHWLNFV
RLFFILLWGAVCLRETFQLLDDPECDKLGRQSWVLLAVISTELLVCLKFG
WDTMTKPIPKSILLWWLAGIVLIIFYTFVKFVILKPTRLPQPEKELCDRR
HKLVVENVANKKKDN
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mRNA from alignment at LSalAtl2s211:1250390..1251916-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003922-699769 ID=EMLSAT00000003922-699769|Name=EMLSAT00000003922|organism=Lepeophtheirus salmonis|type=mRNA|length=1527bp|location=Sequence derived from alignment at LSalAtl2s211:1250390..1251916- (Lepeophtheirus salmonis)
ATGCGAAGTGGAGCTATGGATCGAGCAAGGCAAACAGTGGATGGAGCCAT TGATCGTATCAAGGCTCSCATCCAATTCCAACGTGAAAAGAGTAATTCCA TGTGTCGTCTCCGAACGGCCTACAACTGGCTTGAGGAAAAGGAGAAAAGA GTTACAGACTTTGACGAAAAAGGGAGCTTCCTCTTTCGTGCACACACACT CACCGTTCTCGTTTGCTTAATTGCGTGTCTCGTTTATGTTGCTCTCTTCG AGGATCCTGTAGAAGATACAGAGTTCAATTCTCGGAGAGGTCTCCTTGCT GCAGCATGCTTCTGGGTGGCTCTTGGACTCACTATCATGCCCGATGGACC ATTTTTAAGACCTCATCCTGTTTTTTGGCGCTTTGCTTTTTCTGTGTCCA TAGCTTACGAACTCATACTTATTTTTATACTCTTCCAAACACCGTCCGAT GCAAGAAAATTTCTTAAATTCCTAGATGAAGACTTAGGTAAGGATTTATA ATTCATTTCCTTTTAGAGATTTTATCTCCTTCTAACAATGAGCTTCGTTT CTAGGAGAGCCCATTCCAGAAAAGGATTATGGGGGAAACTGCTATATTTA CGATCCCAATCGTCCGGATAATCCCTATCATAACATCAGGGAAAAAGTGG ATGTTTTCATATTTGCTCATTTCTTCGGATACTGGTGCAAGACTCTTATA TTTCGAGATTGGTGGCTCACAACTGTCATCTCAGTCATGTTTGAATTTCT AGAATACTCATTAGAGCATCAACTACCAAACTTTTCCGAATGTTGGTGGG ACCATTGGATCCTGGATGTTTTTATCTGCAATGGTGGAGGAACTGTTCTC GGATTGTTTATGCTTAAATATTTATCGATGAAAGAGTACAACTGGAGAGG ACTGTGGGATATTCCCACTTATAGAGGCAAAATAAAACGAATCATTGCAC AATTTAGGTATAAAACCCACACCTTTAACAATGTATTTTCATACATAAAA TGTATTTAATTTCTTTCAGCCCTCACGGTTGGATCGAATTTACGTGGAAC CCGTTATCGAGCTTAGAAAGATGGCTTGCCGTTCTAGGTATCATTGCCAT GTTTCTCGTCACGGAATTGAATACTTTCTATTTGAAATTTGTTTTATGGT TTCCACCTGAGCATTGGTTAAACTTTGTACGCTTATTCTTTATTCTTCTA TGGGGAGCTGTTTGTTTGAGGGAAACTTTCCAACTCTTGGATGATCCAGA GTGCGATAAGTTGGGCCGTCAATCATGGGTCCTACTGGCTGTTATCTCGA CTGAACTCTTAGTTTGCCTCAAATTCGGATGGGATACAATGACAAAGCCG ATACCTAAGAGTATTCTTCTCTGGTGGCTCGCTGGCATCGTTCTCATAAT ATTTTATACTTTCGTCAAATTTGTTATACTCAAACCTACTCGTTTACCCC AGCCTGAAAAAGAACTCTGTGATAGGCGCCACAAACTCGTGGTAGAAAAT GTTGCCAATAAAAAAAAAGATAACTGA
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