EMLSAT00000003935, EMLSAT00000003935-699782 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003935
Unique NameEMLSAT00000003935-699782
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s211supercontigLSalAtl2s211:470969..473694 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003935 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003935EMLSAG00000003935-686701Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000017058EMLSAE00000017058-725986Lepeophtheirus salmonisexon
EMLSAE00000017059EMLSAE00000017059-725987Lepeophtheirus salmonisexon
EMLSAE00000017060EMLSAE00000017060-725988Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777968auto777968Lepeophtheirus salmonispolypeptide
EMLSAP00000003935EMLSAP00000003935Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003935

>EMLSAP00000003935 ID=EMLSAP00000003935|Name=EMLSAP00000003935|organism=Lepeophtheirus salmonis|type=polypeptide|length=59bp
MTKVAGEREAVTISFCGNIDIDEYDNYYNGLRASTFRLVFAYSSVMHYGL
NLYRESSIP
back to top

mRNA from alignment at LSalAtl2s211:470969..473694+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003935-699782 ID=EMLSAT00000003935-699782|Name=EMLSAT00000003935|organism=Lepeophtheirus salmonis|type=mRNA|length=2726bp|location=Sequence derived from alignment at LSalAtl2s211:470969..473694+ (Lepeophtheirus salmonis)
ATGACAAAAGTAGCAGGTATTAAAAAACATACAAAACACTCTGTAATATA
TCCAAATTTGAAATTAGCTATTAGGTCAATTCCTCACAATGAAAAATGTT
CAGTACCTTTTTCTCAAAACCAAGTTGAAATAATGACCATCCCTGTAAGG
ACATTGAAGATGAGTATGGGGAAGTACCATCAAACTGTTCAAGCAAACTT
CATTTATTGAGCCAGGAAGAGCTAAATGATCTCATTCAAGATTTACATCT
AAAAAAACAGTATTCCTAAATTTTACACTGAAGATTAAAGGGATGGAATC
TTTTGAAAACAAAGACTAAAATCATTTTTTACATGAAACGCGATTCGGAT
TTCCAAAAACAAATTTGAGTATATGATGTTCTATTGCTTAAAAAAAAGTG
TGATTTTATTGGACAGTGTTATTATTTATCAATTCGAAAGTACCATGTCC
AATCACGTTCCCGAATTCTCCTCTCGCTCTACAAAGTGTCAATTCCGAAA
ATTGCAATTGTTATTAATTACAAATGATTTCACTATGCATCAAAATGAAG
GGCTTGGAGAGTCCGCAGGCTGACCCACATTTACTATTACTATTATTTAA
GCTGTAAAAATGACTATGGCCATTCAAATTTTCAACCTCTTCAGGTTTGG
CCTTTAAAGCCTTGTTTTAAATCAATTTTTTTAAGGGTATACCTAAGATT
TAGTGCCATATTTCCACATGAAGGAACTATAAAAATGAAAAGCAAAGAAA
ATAACAAATTGATAAAAATATTTCAGCATTTGAAAATTGAGTTATTTATT
ACTTTATCTTGATTACAATTAATAAAAATGGATATAACCACCCAAAATTG
AGTAAAATGAAGACCTTACATAGAAGCTAATTTTTTTTTCTTCAAGTGTC
TTATATCATAGCTGAAGTTATAGTATTAGTTATAGTTATTGTATTTCAAA
TTTAAAAAAAAAACTTTAAAAAACGGATGATTTGGATTACTTTTTGGTCA
ATTTAGTTTTTAATATTTATAAAGAAATTTAATAAAATAAGCTGGGTTGT
TTGACTTGAATGTAGATATCAATAATATTCCGTGGAAAAAATTGAATAGC
TAATGAGTGCATAACTCACACGGTGGTTGAATACTAATCAATGTATTTGA
ATATTAAGCATCTATCCCCTTGCATCTAAATTATGAATTTCATAGTTAGT
TAATGCAACATGTATTTACTTACATTTGTAGATATAAAAATATAATGGCA
TGAACTCATTTTGATTATATTAAGCATTCGATTCGAAGCATTCTACTTCT
ACTCTTCCTGCCTTTTCTCGCTCTGTGCTAGTGATGAAATAACTTTGTGT
AAGAAGAGATTGTATGTCACTAATGATAGGAGTGTGATGTACTCAATAAA
CTTTATTGGAGGGMGGAGCAATCGATGGTAAAATGAGATCGTACCCTACA
CTATCAGCTCAGAATATCAAGTTCCAGTCATTTTGGATTCCCTGAAGCAC
ATTATGAATATAATGCGATTCCTTAAACAAAAGGGATGGCACCAATTGTT
TGGACATCTATATAGAATAGAGTGGATACTTTGCAAACTTAGACTACAAW
GATCCAAAAGGACGCCATGTTCTTCACTTACAAAATAACGACTGTGTGCT
ATTTTTTTTTTCTTGACAAAAGCAAGCCCCGCTTGGATTAAGTCAATTTA
TGTACATACATTGTTTTGGGGATTGTAGTGCATTAATTCCTTCAAATCCT
GGGAGTTGGTCACGAACAGACTCGGTCAGATTAAGAAAATTATATTCAAA
TCACCTGGCATCATTTTCAAAGTGGAACACACACCAACTTTTGGATACCT
TTAGGAGAAAGAGAGGCTGTAACGATTTCCTTTTGTGGAAATATAGACAT
TGATGAATATGACAACTACTATAATGGATTGAGAGCCTCCACCTTTAGAC
TGGTGTTTGCCTATAGTTCAGTAATGCACTATGGATTAAATTTGTACGTA
CATTAAATACCATAAGATTTATATTGAACTTACATTTGGCATAGTTTTAG
CAAACACAGACAAGATTGAATAACTCTGAGTATGGAGACAATTGGAACAA
TTCTAAACAGGAGTTGAATAAGTAATTTATATGCTCAAAAAACTAAACTG
ATTGGTTTTACTTATGTATATTTTAAGTAAATAATTTTAATAAATGTTGT
AACAGTGTTGTAGGAAAATAAAGTTGTTTTATATCCTTCTTTTTAACTTT
GACTATTGGGCATAAAAAAACTAAAAAACGAGTACAAAATTGGACAAGTG
TCGTTTTTATATTCAATTTAGTATTAAACAAATAAGTAAACACACATCCT
GTAAATGATATAATATAATAAAAAATTATGAAAATATAAATCCCATTCAT
AATGTGGGAACAAAAATCTCGAGATTCTTTTTCATGATCTGTACTTTCAA
CTGGATTTTAGGAGGAATAAGTACATAATTCTTAAAATATTTTTTAATGT
CTTATTCTTGGTTTATTCCTTGCTACGGATTGTAACTCCAAGCCAGGATT
GTTTGGAATTTCTCTAAAACCAAGGCACTGAAACGGATACACTTTTTGAA
AGTTTATTAGAATTATCTTTTGTATTCCAGCCCAGTGATTTTTGAATGTT
CGACTGTCACTTCTTACAAAATAATAGCTTATATATATATATATTCTATG
TTAAGCGGGAGTCTTCTATACCATAG
back to top
Add to Basket